YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109483347, gi...
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPAANMMENL QLPALQVPEP QGAPEGSAVW SSSSTPTLRR RRFKMRRMKN VQEQSLEAGL  60
   61 VAPDLPGVLA PGKEFLQLPS IEITPSSDED TPWSNCSTPS ASPRRKRFLL RKWLRVRERK 120
  121 ECSESSSQQS SQQSSHDDDS SRFLSPRVRE ESTASNSNRS TPACSPILRK RSRSPTPQNQ 180
  181 DGDTMVEKGS DHSSDKSPST PEQGVQRSCS SQSGRSGGKN SKKSQSWYNV LSPTYKQRNE 240
  241 DFRKLFKQLP DTERLIVDYS CALQRDILLQ GRLYLSENWI CFYSNIFRWE TLLTVRLKDI 300
  301 CSMTKEKTAR LIPNAIQVCT DSEKHFFTSF GARDRTYMMM FRLWQNALLE KPLCPKELWH 360
  361 FVHQCYGNEL GLTSDDEDYV PPDDDFNTMG YCEEIPIEEN EVNDSSSKSS IETKPDASPQ 420
  421 LPKKSITNST LTSTGSSEAP VSFDGLPLEE EVMEGDGSLE KELAIDNIIG EKIEIMAPVT 480
  481 SPSLDFNDNE DIPTELSDSS DTHDEGEVQA FYEDLSGRQY VNEVFNFSVD KLYDLLFTTS 540
  541 PFLRDFMEQR RFSDIIFHPW KKEENGNQSR VILYTITLTN PLAPKTATVR ETQTMYKASQ 600
  601 ESECYVIDAE VLTHDVPYHD YFYTINRYTL TRVARNKSRL RVSTELRYRK QPWGFVKTFI 660
  661 EKNFWSGLED YFRHLETELT KTESTYLAEI HRQSPKEKTN KSSAVRRRKR PHAHLRVPHL 720
  721 EEVMSPVTTP TDEDVGHRIK HVAGSTQTRH IPEDTPDGFH LQSVSKLLLV ISCVLVLLVI 780
  781 LNMMLFYKLW MLEYTTQTLT AWQGLRLQER LPQSQTEWAQ LLESQQKYHD TELQRWREII 840
  841 KSSVMLLDQM KDSLINLQNG IRSRDYTAES DEKRNRYH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle