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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|149031931, gi...
Protein type: Transmembrane
Type Confidence: 0.65
Topology Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCSLGLFPPP PPRGQVTLYE HNNELVTGNS YESPPPDFRG QWINLPVLHL TKDPLKAPGR  60
   61 LDHGTRAAFI HHREQVWKRC INVWHDVGLF GVLNEIANSE EEVFEWVKTA SSWALALCGR 120
  121 ASSLHGSLFP HLSLRSEDLI AEFAQVTNWS SCCLRVFAWH PHTNKFAVAL LDDSIRVYNA 180
  181 NSTIVPSLKH RLQRNVAALA WKPLSASVLA VACQSCILIW TLDPTSLSTR PSSGCAQVLS 240
  241 HPGHTPVTSL AWAPNGGWLL SASPVDAVIL VWDVSTETCV PLPWFRGGGV TNLLWSPDGS 300
  301 KVLATTPSAV FRVWEARMWT CEGWPTLSGR CQTGCWSPDG KRLLFTVLGE ALIYSLSFPE 360
  361 PCGTEKGHVG GAKSATIVAD LSETTIQTPD GEERLGGEAH AMVWDPSGER LAVLMKGNPR 420
  421 VQDGNPVILL FRTRNSPVFE LLPCGVIQGE PGAQAQLVSF HPAFNKGALL SVCWSTGRIT 480
  481 HIPLYFVNAQ FPRFSPVLGR AQEPPAGGGG SVHEVPLFTE TSPTSAPWDP LPGLPSAQPH 540
  541 SPHSHL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle