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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109482941
Protein type: Transmembrane
Type Confidence: 0.65
Topology Confidence: 0.29
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTKTVIRSQ TSHRGFSAGS ARLPGLTRSG FSSVSVCRSR GSGGSRAVCG GAGFGSRSLC  60
   61 GVGSSKRISI GGGSCGIGGG YGGRFGGSFS YGGGAGGSFG FGAGAGFGGG YGGAGFPVCP 120
  121 PGGIQEVTIN QSLLIPMNLQ IDPTIQRVRT EEREQIKTLN NKFASFIDKV RFLEQQNKVL 180
  181 DTKWALLQEQ GTKTVRQGLE TLFEQYINNL RRQLDNIRGQ RGRLDSELRN MQGTVEDYKS 240
  241 KYEDEINRHS YAENEFVTLK KDVDAAFMRK VELQGNADSL ADEVNFLRVI FEAELSQMQT 300
  301 RISDTSVVLS MDNNRSLDLD SIIAEVKAQY EEIAKRSRAE AESWYQTKYE ELQITAGRHG 360
  361 DDLRNTKQEI SEINRMIQRL RSEIDHVKKQ IAKLQAAIAE AEQRGEMALK DARGKLEGLE 420
  421 DALQKAKQDM ARLLKEYQDL MNVKLALDVE IATYRTLLEG EECRLNGEGV GPVNISVVQS 480
  481 TMSSGYGSAG GASSSIGMGG GSSFSYGGSH SIGGGFSAGS GRGISSGLSS SGGSSSTIKY 540
  541 TTTSSTRKSY RP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle