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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109480243, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLLGLLSLL HSTFFGNQLA VVSPSAGAAA PPGQARIGLC PSGTTPSACA AETPGDLDTP  60
   61 GLACRPSQEG DRPGLLQQSQ AQALQELKMA SSVASYEQLV RQVEALKAEN THLRQELRDN 120
  121 SSHLSKLETE TSGMKEVLKH LQGKLEQEAR VLVSSGQTEV LEQLKALQTD ISSLYNLKFH 180
  181 APALGPEPAA QTPEGSPVHG PAPSKDSFGE LSRATIRLLE ELDQERCFLL SEIEKEEKEK 240
  241 LWYYSQLQGL SKRLDELPHV DTQFSMQMDL IRQQLEFEAQ HIRSLMEERF GTSDEMVQRA 300
  301 QIRASRLEQI DKELLEAQDR VQQTEPQALL AVKPVAVEEQ EAEVPTHPED VTPQPGNSKV 360
  361 EVVFWLLSML ATRDQEDTAR TLLAMSSSPE SCVAMRRSGC LPLLLQILHG TEAGSVGRTG 420
  421 TPGAPGAKDA RMRANAALHN IVFSQPDQGL ARKEMRVLHV LEQIRAYCET CWDWLQARDS 480
  481 GTESGTGDTP VPIEPQICQA ACAVMKLSFD EEYRRAMNEL GGLQAVAELL QVDYEMHKMT 540
  541 QDPLNLALRR YAGMTLTNLT FGDVANKATL CARRGCMEAI VAQLASESEE LHQVVSSILR 600
  601 NLSWRADINS KKVLREVGSM TALMECVLRA SKESTLKSVL SALWNLSAHS TENKAAICQV 660
  661 DGALGFLVST LTYRCQGNSL AVIESGGGIL RNVSSLIATR EDYRQVLRDH NCLQTLLQHL 720
  721 TSHSLTIVSN ACGTLWNLSA RSPRDQELLW DLGAVGMLRN LVHSKHKMIA MGSAAALRNL 780
  781 LAHRPAKYQA AAMAVSPGTC VPSLYVRKQR ALEAELDTRH LVHALGHLEK QGLPEAETTS 840
  841 KKPLPPLRHL DGLVQDYASD SGCFDDDDAP SLAAAATTAE PASPAVMSMF LGGPFLQGQA 900
  901 LARTPPARQG GLEAEKETGG EAAVAAKAKA KLALAVARID RLVEDISALH TSSDDSFSLS 960
  961 SGDPGQEAPR EGRAQSCSPC RGTEGGRREA GSRAHPLLRL KAAHTSLSND SLNSGSTSDG1020
 1021 YCTREHMTPC PLAVLTEHRD GPVCGQTRPS RLDLDLPSRA ELPARDTAAT DARVRTIKLS1080
 1081 PTYQHVPLLD GAPGAGVRPL VGLGTSPGTR KQAWIPADSL SKVPEKLVAS PLPVTSKVLQ1140
 1141 KLVAQDGPMS LSRCSSLSSL SSTGHAVPSQ VENLDDSDSS LEELEEAGPG EAELDRAWRA1200
 1201 SGSTSLPVSI PAPQRGRSRG LGVEDATPSS SSENCVQETP LVLSRCSSVS SLGSFESRSI1260
 1261 ASSIPSDPCS ALGSGTVSPS ELPDSPGQTM PPSRSRTPPA PPGQPEASQF SLQWESYVKR1320
 1321 FLDIADCRER CQPPSELDAG SVRFTVEKPD ENFSCASSLS ALALHELYVQ QDVELRLRPP1380
 1381 ACPERAVGGG GGHRRRDEAT SRLDGPAPAG SRARSAADKE LEALRECLGA AMPARLRKVA1440
 1441 SALVPGRRAL PVPVYMLVPA PARGDDSGTD SAEGTPVNFS SAASLSDETL QGPSRDKPAR1500
 1501 PGDRQKPTGR AAPARQTRGH RPKAAGAGAG KSTEHTRGAN RNRAGLELPL SRPQSARSNR1560
 1561 DGSCQTRTRG DGALQSLCLT TPTEEAVYCF YDSDEEPPAT APPTRRASAI PRALKREKPA1620
 1621 GRKETPTRAT QPATLPVRAQ PRLIVDETPP CYSLTSSASS LSEPEASEQP ACHPRVEEQG1680
 1681 SKQDSSPRAE EELLQRCISL AMPRRRTQVP SSRRRKPRAV RSDIRPTELP QKCREEVPGS1740
 1741 DPASDLDSVE WQAIQEGANS IVTWLHQAAA KASLEASSES DSLLSLVSGL SASSTLQPSK1800
 1801 LRKGRKPVAE AGGAWRPEKR GTTSTKGSGS PRFPSGPEKA KGTQKTMAGE SAMLRGRTVI1860
 1861 YTASPASRAQ SKGISGPCSA PKKMGTSGTT QPETATKTPS PEQQRSRSLH RPGKISELAA1920
 1921 LSHPPRSATP PARLTKTPSS SSSQTSPASQ SLPRRSPLAT PTGGPLPGPG GSPVPKSPAR1980
 1981 ALLAKQHKTQ KSPVRIPFMQ RPARRVPPPL ARPSPEPGSR GRAGAEGTPG ARGSRLGLVR2040
 2041 VASTRSSGSE SSDRSGFRRQ LTFIKESPGL LRRRRSELSS ADSTVSTSQT ASPCRGRPAL2100
 2101 PAVFLCSSRC DELRASPRQP LAAQRVPQAK PGLAPRAPRR TSSESPSRLP VRATPGRPET2160
 2161 VKRYASLPHI SVSRRPDSAV SVPTTQANAT RRGSDGEARP LPRVAAPGTT WRRIKDEDVP2220
 2221 HILRSTLPAT ALPLRGSSPE DSPAGTPHRK TSDAVVQTED VATSKTNSST SPSLESRDPP2280
 2281 QAPISGPVAP LGSDVDGPVL AKPPASAPFT HEGLSVVTGG FPTSRHGSPS RAARVPPFNY2340
 2341 VPSPMVVATM TSDSAVEKAP VTSPASLLE

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