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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109481562, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDDAHLEEDL EDKDTEFTWE VKANDRAYHK QFRKKGFLCW RQKKYKSNAI HTAKYNVFSF  60
   61 LPLNLYEQFR RVSNLYFLFI IILQSIPEIS TLPWFTLFAP LVCLLMIRAA RDLVDDIGRH 120
  121 RSDRIINNRP CQILKGKSFL WKKWKNLCVG DVVCLSKDNI VPADLLLLAS TEPSSLCYLE 180
  181 TADIDGETNL KFRQALMVTH HELTSPKKMA SFQGIVTCEE PNSRMHHFVG SLEWNSRKYP 240
  241 LDIGNLLLRG CKIRNTDTCY GLVIYAGLDT KIMKNCGKIH LKRTKLDLMM NKLVILIFMS 300
  301 LVIASMFLTL GFAFMVKEFK AKHHYMSSMQ GRTDAMDSFF IFWGFLILLS VMVPMAMFII 360
  361 AEFIYLGNSI FINWDLSMYY EPLDIPAKAR STSLNDHLGQ VQYIFSDKTG TLTQNIMTFK 420
  421 KCCINGCTYD SDDEHGTLRK RNPYSWNPFA DGKLQFYNKE LESLVRGKQD RAVQEFWRLL 480
  481 AICHTVMVQE KDNQLLYQAA SPDEEALVAA ARNFGYVFLS RTQDTITLVE LGEERVYQVL 540
  541 AMMDFNSVRK RMSVLVRNPE GSICLYTKGA DTVILERLHH KGVMEATTEE VLAAFAEQTL 600
  601 RTLCLAYKDV AEDAYKEWEP EHQEAALLLQ NRAQALHQVY NKLEQNLQLL GVTAIEDKLQ 660
  661 DGVPETIRCL KKGNIKMWVL TGDKPETAVN IGFACQLLSE NMSILEDKDI KGLLENYWDE 720
  721 NEHQRAFQTM THHNMALVIN GEFLDQLLLS LRKEPRALVQ NAVVDEATQE PGVSALDFLQ 780
  781 ARRISQMWRN FGTTMATSQS DASKTRESPE ERRERAFVDL ASKCQAVICC RVTPKQKALV 840
  841 VALVKKYQQV VTLAIGDGAN DVNMIKTADI GVGLAGQEGM QAVQNSDYVL AQFCYLQRLL 900
  901 LVHGRWSYMR ICKFLRYFFY KTVASMMAQI WFSLFNGFSA QPLYEGWFLA LFNLLYSTLP 960
  961 VLYIGLFEQD VTAEKSLKMP ELYTAGQKDE LFNYSIFVQA IAHGTITSLI NFFVTILVSY1020
 1021 DMTKTGSSPD YQSFGVLVAI SSLLSITLEV ILVVKYWTLL FVGTVVVSLS SYVIFTSLTE1080
 1081 SLLLFRISPK TFPFLFADYN VIREPSSLLV IVLNVTLNTL PMLAVRIIRR TVLKRHPKKE1140
 1141 EEVPSEELTV EPAMRLRRGM PARRSSYAFS HHEGYANLIT QGTILRRHTH VDEFYGDTAC1200
 1201 NSPNPSEEDV PWQHKESIFN PRKISILAKK RRQHYGKGSQ GEVHPNASSQ TTEKQTAINI1260
 1261 DNHETKKLPT TTSAMSGQLQ VSSSEDQAFY SALSQYSLAS RPERMDVRSS SWKGPLLRDS1320
 1321 ASSRSSHLEV TTQLHSHTSS 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle