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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109480586
Protein type: Globular with Signal Peptide
Type Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLFGFASCQ LILVPSQGRT AGGHDHSRSN LDEKDSGSAG SGFSPSPTSL VPTGCRGSLG  60
   61 AAAFYVRSRC RFARPPERNG LSSPGHRASA LPMKGRRPRG DPRRLAGSRG DGLLAPGHDA 120
  121 LIHQAVCRRA ETDTPGTSPT TVLLLRASRP MCNTNMSVST EGAAGTSQIP ASEQETLVRP 180
  181 KPLLLKLLKS VGAQKDIYTM KEIIFYIGQY IMTKRLYDEK QQHIVYCSND LLGDVFGVPS 240
  241 FSVKEHRKIY AMIYRNLVVV SQQDSGTSPS ESRCQPEGGS DLKDPVQASQ EEKPSSSDVV 300
  301 SRPSTSSRRR AISETEENTD ELPGERQRKR HRALSFDESL GLCVLREICC ERSSSSEATD 360
  361 TPSHQDLDDG VSDHSADCLD QDSVSDQFSV EFEVESLDSE DYSLSDEGHE LSDEDDEVYR 420
  421 VTVYQAGESD ADSFEGDPEI SLADYWKCTS CNEMNPPLPS HCNRCWTLRE NWLPDDKGKD 480
  481 KVEISEKAKL ESSDQAEEGL DVPDGKKVTE DDAKESSAED SEEKVAQMLL SQESDDYSQP 540
  541 STSSSIVYSS QESGKELKED TQDKEESMES SFSLNAIEPC VICQGRPKNG CIVHGKTGHL 600
  601 MSCFTCAKKL KKRNKPCPVC RQPIQMIVLT YFN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle