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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|149024679, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKCTGIWKML VAAVCLALLG CLQAQEFRGH VSIILLGATG DLAKKYLWQG LFQLYLDEAG  60
   61 KGHSFSFHGA ALTAPQQGQK LMDKALESLS CPKDLVPSRC DELKAQFLQL SQYRQLKTVE 120
  121 DYQTLNKDIE TQVQQDGLWE AGRVFYFSVP PFAYADIARN INSSCRPHPG AWLRVVFEKP 180
  181 FGHDHLSAQQ LASELGSFFQ EEEMYRVDHY LGKQAVAQIL PFRDQNRKAL DGLWNRHHVE 240
  241 RVEIILKETV DAGGRASFYE EYGVIRDTLQ NHLTEILTLV AMELPPNISS SAAVLQHKLQ 300
  301 AFQALRGLQK SNAILGQYQA YSGQVRQELQ KPDGFQSLTP TFAGVLVHID NLRWEGVPFI 360
  361 LMSGKALDER VGYVRILFKN RAYCTQGERH WVPERSRCLP QQIVFYIGHG ELGHPAILVS 420
  421 KNLFKPSLPA QSWKGVQDQP GLHLFGRPLS DYYAYRPVRE QDAYSTLLSH IFHCRKESFI 480
  481 TTENLLASWV FWTPLLDSLS FEVPRLYPGG AENDHLLDFE FSGGQLTFSQ QQLEVLMPEL 540
  541 GSVPKPSDFQ VLRAQYRKSP LITAWPEELI SKLANDIEAA AVQAVRRFGK FHLALSGGSS 600
  601 PIALFQQLAT GHYSFPWAYT HLWLVDERCV PLSDPDSNFQ GLQAHLLQHV RVPYYNIHPM 660
  661 PVHLHQRLCA EEDQGAQTYA SEISALVANS SFDLVLLGMG TDGHTASLFP QSPRGLDGDQ 720
  721 LVVLTESPFR PHQRMSLSLP LINRAKKVAV LVMGRTKREI TTLVSRVGHE PKKWPISGVV 780
  781 PLSGQLVWYM DYEAFLG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle