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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|149024481, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLRAAGFCL ALLWGCALAA AAAQGKEVVL LDFAAMKGEL GWLTHPYGKG WDLMQNIMND  60
   61 MPIYMYSVCN VVSGDQDNWL RTNWVYREEA ERIFIELKFT VRDCNSFPGG ASSCKETFNL 120
  121 YYAESDVDYG TNFQKRQFTK IDTIAPDEIT VSSDFEARNV KLNVEERMVG PLTRKGFYLA 180
  181 FQDIGACVAL LSVRVYYKKC PEMLQSLARF PETIAVAVSD AQPLATVAGT CVDHAVVPYG 240
  241 GEGPLMHCTV DGEWLVPIGQ CLCQEGYEKV EDACQACSPG FFKSEASESP CLQCPEHTLP 300
  301 STEGATSCQC EEGYFRAPED PLSMPCTRPP SAPHYLTAIG MGAKVELRWT APQDTGGRKD 360
  361 IVYSVTCEQC WPESGECGSC EASVQYSEPP QALTRTSVTV SDLEPHMNYT FTVEARNGVS 420
  421 DLVNSRSFRT ASVSINQTEP PKVRLEDRST TSLSVAWSIP VPQQSRVWKY EVTYRKKGDA 480
  481 NSYNVHRTDG FSVTLDGLAP GTTYLVQVQA LTQEGQGAGS KVHEFQTLST EGSATMAVIG 540
  541 GVAVGVVLLL VLAGIGFFIH RRRRNLRARQ SSEDVYFSKS EQLKPLKTYV DPHTYEDPNQ 600
  601 AVLKFTTEIH PSCVSRQKVI GAGEFGEVYK GTLKSSSGKK EIPVAIKTLK AGYTEKQRVD 660
  661 FLSEASIMGQ FSHHNIIRLE GVVSKYKPMM IITEYMENGA LDKFLREKDG EFSVLQLVGM 720
  721 LRGIASGMKY LANMNYVHRD LAARNILVNS NLVCKVSDFG LSRVLEDDPE ATYTTSGGKI 780
  781 PIRWTAPEAI SYRKFTSASD VWSYGIVMWE VMTYGERPYW ELSNHEVMKA INDGFRLPTP 840
  841 MDCPSAIYQL MMQCWQQERS RRPKFADIVS ILDKLIRAPD SLKTLADFDP RVSIRLPSTS 900
  901 GSEGVPFRTV SEWLESIKMQ QYTEHFMVAG YTAIEKVVQM SNDDIKRIGV RLPGHQKRIA 960
  961 YSLLGLKDQV NTVGIPI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle