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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109476805
Protein type: Globular with Signal Peptide
Type Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTNPKSGVAE SAGLACSRAA AGGNRMKDSE NKGASSPDME PSYGGGLFDM VKGGAGRLFS  60
   61 NLKDNLKDTL KDTSSRVIQS VSSYTKGDLD FTYVTSRIIV MSFPMDSVDI GFRNQVDDIR 120
  121 SFLDSRHLDH YTVYNLSPKS YRTAKFHSRV SECSWPIRQA PSLHNLFAVC RNMYNWLLQN 180
  181 PKNVCVVHCL DGRAASSILV GAMFIFCNLY STPGPAVRLL YAKRPGIGLS PSHRRYLGYM 240
  241 CDLLADKPYR PHFKPLTIKA ITVSPIPFFN KQRNGCRPYC DVLIGETKIF STCTDFERMK 300
  301 EYRVQDGKIF IPLNITVQGD VIVSMYHLRS TIGSRLQAKV TNTQIFQLQF HSGFIPLDTT 360
  361 VLKFTKPELD ACDVPEKYPQ LFQVTLDIEV QPQDKVIDLT PPWEHYCTKD VNPSILFSSQ 420
  421 QEHQDTLALG GQAPADLPPD HPRNLGQGGF FASLCWQDQK SEKSRCEEDH AALVNQESEQ 480
  481 SDDELLTLSS PHGNADGDKP HGAKKPGKKQ QEPAAPPPPE EVDLLGLEGS DVSTNFSPLA 540
  541 APPSNSELLS DLFGGGGATG PAQAGQVGVE DVFHPSGPAS AQSTPRRATT SASASPTLRV 600
  601 GEGATFDPFG APAKPPGQDL LGSFLNTSNA SSDPFLQPTR SPSPTVHASS TPAVNIQPDI 660
  661 AGGWDWHAKP GGFGMGSKSA ATSPTGSTHG TPTHQSKPQT LDPFADLGTL GSSSFASKPT 720
  721 TPTGLGGGFP PLSSPQKASP QPMGGGWQQP AGYNWQQAQP KPQSSMPHSS PQNRPNYNVS 780
  781 FSAMPAGQSD RGKGSTNLEG KQKAADFEDL LSSQGFNAHK DKKGPRTIAE MRKEEMAKEM 840
  841 DPEKLKILEW IEGKERNIRA LLSTMHTVLW AGETKWKPVG MADLVTPEQV KKVYRRAVLV 900
  901 VHPDKATGQP YEQYAKMIFM ELNDAWSEFE NQGQKPLY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle