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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109476609
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSYNVLLLA SLFLSLMLLC PVWAQFPREC ANIEALRSGV CCPDLFPSSG PGTDPCGSSS  60
   61 GRGRCVAVTA DSRPHSRHYP HDGRDDREGW PLRFFNRTCQ CNGNFSGHNC GACRPGWRGA 120
  121 ACNQKILTVI RRNLLDLSTE EKSHFVRALD MAKRTTHPQF VIATRRSEDM LGPDGSTPQF 180
  181 ENISIYNYFV WTHYYSVKKT FLGAGQESFG DVDFSHEGPA FLTWHRYHLL QLERDIQEML 240
  241 QEPSFSLPYW NFATGKNICD ICTDDLMGSR SNFDSTLISP NSVFSQWRVV CESLEEYDTL 300
  301 GTLCNSTEGG PIRRNPAGNV GRPAVQRLPA PQDVTRCLEV RVFDTPPFYS NSTNSFRNTV 360
  361 EGYSDPTGKY DPAVRSLHNL AHLFLNGTGG QTHLSPNDPI FVLLHTFTDA VFDEWLRRYN 420
  421 ADISTFPLEN APIGHNRQYN MVPFWPPVTN TEMFVTAPDN LGYAYELQWP GQEFTVSEII 480
  481 TIAVIAGLLL VAAIFGSASC LIRSRSTKNE ANQPLLTDHY QRYAEEYEEL PNPNQTMV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle