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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109475757
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLRAAGFCL ALLWGCALAA AAAQGKEVIM LAFLHASFKQ NLGWLLHLAG RGWDLMQNIM  60
   61 NDMPIYMYSV CNVVSGDQDN WLRTNWVYRE EAERIFIELK FTVRDCNSFP GGASSCKETF 120
  121 NLYYAESDVD YGTNFQKRQF TKIDTIAPDE ITVSSDFEAR NVKLNVEERM VGPLTRKGFY 180
  181 LAFQDIGACV ALLSVRVYYK KCPEMLQSLA RFPETIAVAV SDAQPLATVA GTCVDHAVVP 240
  241 YGGEGPLMHC TVDGEWLVPI GQCLCQEGYE KVEDACQACS PGFFKSEASE SPCLQCPEHT 300
  301 LPSTEGATSC QCEEGYFRAP EDPLSMPCTR PPSAPHYLTA IGMGAKVELR WTAPQDTGGR 360
  361 KDIVYSVTCE QCWPESGECG SCEASVQYSE PPQALTRTSV TVSDLEPHMN YTFTVEARNG 420
  421 VSDLVNSRSF RTASVSINQT EPPKVRLEDR STTSLSVAWS IPVPQQSRVW KYEVTYRKKG 480
  481 DANSYNVHRT DGFSVTLDGL APGTTYLVQV QALTQEGQGA GSKVHEFQTL STEGSATMAV 540
  541 IGGVAVGVVL LLVLAGIGFF IHRRRRNLRA RQSSEDVYFS KSEQLKPLKT YVDPHTYEDP 600
  601 NQAVLKFTTE IHPSCVSRQK VIGAGEFGEV YKGTLKSSSG KKEIPVAIKT LKAGYTEKQR 660
  661 VDFLSEASIM GQFSHHNIIR LEGVVSKYKP MMIITEYMEN GALDKFLREK DGEFSVLQLV 720
  721 GMLRGIASGM KYLANMNYVH RDLAARNILV NSNLVCKVSD FGLSRVLEDD PEATYTTSGG 780
  781 KIPIRWTAPE AISYRKFTSA SDVWSYGIVM WEVMTYGERP YWELSNHEVM KAINDGFRLP 840
  841 TPMDCPSAIY QLMMQCWQQE RSRRPKFADI VSILDKLIRA PDSLKTLADF DPRVSIRLPS 900
  901 TSGSEGVPFR TVSEWLESIK MQQYTEHFMV AGYTAIEKVV QMSNDDIKRI GVRLPGHQKR 960
  961 IAYSLLGLKD QVNTVGIPI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle