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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109473957
Protein type: Globular with Signal Peptide
Type Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQWRALVLGL VLLRLGLHAV LWLVFGLGPS MGFYQRFPLS FGFQRLRDPD GSGPVGPPGG  60
   61 PSWLHRPRRG TEGRLETPPG PGPGPGVCGP AHWGYALGGG GCGLDEYERR YSGAFPPQLR 120
  121 AQMRDLARGM FVFGYDNYMA HAFPQDELNP IYCRGRGPDL GDPSNLNIND VLGNYSLTLV 180
  181 DALDTLAIMG NSSEFQKAVK LVINTVSFDK DSTVQVFEAT IRVLGSLLSA HRIITDSKQP 240
  241 FGDMTIEDYD NELLYMAHDL AVRLLPAFEN TKTGIPYPRV NLKTGVPPDS NNETCTAGAG 300
  301 SLLVEFGILS RLLGDSTFEW VARRAVKALW NLRSNDTGLL GNVVNIQTGH WVGKQSGLGA 360
  361 GLDSFYEYLL KSYILFGEKE DLEMFNAAYQ SIQSYLRRGY PPLYVNVNMF SGQLMNTWID 420
  421 SLQAFFPGLQ VLIGDVEDAI CLHAFYYAIW KRYGALPERY NWQLQAPDVL FYPLRPELVE 480
  481 STYLLYQATK NPFYLHVGMD ILQSLEKYTK VKCGYATLHH VIDKSKEDRM ESFFLSETCK 540
  541 YLYLLFDEEN PVHKSGTRYM FTTEGHIISV DKRLRELPWK EFFSEDGERD QEEKFVHRPK 600
  601 SQELRVINSS SNCNRVPDER RYSLPLKSIY MRQIDQMVGL I

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle