YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109470836
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAELTTSRSP ETRPPPNLGE GCAEGGRQRV NTRERGRLRA LAHGQVQKAA WAEVGDRPGG  60
   61 RGRGEGKGAR QGRFGGDSAA RGRGWPAHAS SRGSRTDLAD EGATLVASGL TPDQRVRGAA 120
  121 LRSVTDSCCE PAWNSRVLSE KPGPRPRQGC TPAPASQAWV GERLCGFRAS GGVRPKEVFV 180
  181 SHWGALDLMA SFLKVPTAAT LGYFKNDTDD NPDVREDSLG DEVFDTVNSS IVSGESIRFF 240
  241 VNVNLEVQPS KSDIEAATGG CVLLHTSRKY LKLKNFEEEV RAHRDLDGFL AQASIILNET 300
  301 ATSLDDVLRT MLNRFAQDPN HAEPDCDLDL LMAKLFTDAG GPMESKVHLL SDTIQGVTAT 360
  361 VRGLQYEQSW LCIVCTMKSL QKRHVCISRL VRPQNWGENS CEVRFVILVL APPKMKSTKT 420
  421 AMEVARTFAT MFSDITFRQK LLKTRTEEEF KEALVHQRQL LTMMMPRAAG HSMSSLHTHR 480
  481 HPRPPKCKDF FPFGKGIWVD IMRRFPVYPL DFTDGIIGKG KTVGKYVTTT LFLYFACLLP 540
  541 TIAFGSLNDE NTNGAIDVQK TIAGQSIGGL LYALFSGQPL VILLTTAPLA IYTQVIRVIC 600
  601 DDYNLDFNAF YAWTGLWNSF FLALYAFLNL SLLMNLFKRS TEEIIALFIS ITFVLDAVKG 660
  661 MVKIFWKYYY GHHYHTKRTS SLASLLGISR SPNTSLHTAL NTSFLASPIE MTTASSPIST 720
  721 HSNQATAVLS LLIMLGTLWL GYTLYQFKKS PYLHPCVRET LSDCALPIAV LSFSLISSYG 780
  781 FQEIEMSKFR YNPSESLFEV AQIHSLSFKA ISSAMGLGFL LSLLFFIEQN LVAALVNAPE 840
  841 NRLVKGTAYH WDLLLLAIIN TGLSLFGLPW IHAAYPHSPL HVRALALVEE RVENGHIYET 900
  901 IVNVKETRLT ALGASVLVGL SLLLLPFPLQ WIPKPVLYGL FLYIALTSLD GNQLFSRVAL 960
  961 LLKEQTSYPP THYIRRVPQR KIHYFTGLQI LQLLLLCAFG MSSLPYMKMV FPLIMIAMIP1020
 1021 IRYNLLPRII EAKYLDVMDA EHRP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle