YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109468929
Protein type:	Globular with Signal Peptide
Type Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFTLGLGSR AWRVSWERAA AAAAAVPGAG GALGSGSLRV SSRRGPRLAR ALPLCLSXGG  60
   61 GARALPDCAG PSPRRSGARQ LAGPRAMEQT YGEVNQLGGV FVNGRPLPNA IRLRIVELAQ 120
  121 LGIRPCDISR QLRVSHGCVS KILARYNETG SILPGAIGGS KPRVTTPNVV KHIRDYKQGD 180
  181 PGIFAWEIRD RLLADGVCDK YNVPSVSSIS RILRNKIGSL AQPGPYEASK QPPPQPALPY 240
  241 NHIYQYPYPS PVSPTGTKMG SHPGVPGSAG HVSIPRSWPS AHSVSNILGI RTFMEQTGAL 300
  301 AGSEGAAYSP KVEDWASVNR AAFSTSSAVN GLEKPALEAD IKYTQSASSL SAVGGFLPAC 360
  361 AYPASNQHGV YSAPAAGYLS PGPPWPPAQA PPLAPHGAGV AVHGGELAAA MTFKHPSREG 420
  421 TDRKPPSPGG KATDALGSLH GLSIPASTS

Type	Start	End	Confidence
Signal Peptide	1	34	0.89
N-region	1	25
H-region	26	31
C-region	32	34
Cleavage Site	34	35
Non-Cytoplasmic	35	449	0.99