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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109467909, gi...
Protein type: Transmembrane
Type Confidence: 0.54
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVARVKGQR AGGTPNMAAA RAVARGPGAD ARRPLSPQAA RGPRLLLLLA VVAAVGPQEG  60
   61 GGARLYRVGE DAVWLLDSGS VRSATGNSSA AWLVQFHSSW CGHCIGYAPT WRALAADVRD 120
  121 WAAAIRVAAL DCAEEKNQDV CRTYDIHFYP TFRYFRAFTK EFTTGENFKG PDRELRTVRQ 180
  181 TMIDFLQNHT EGSRPPACPP LDPIQSSDIL SFMDSHSGQY HAVVFESNGS YVGREVILDL 240
  241 IPYDNIMVSR ALDTDKAFLG TLGISSVPSC YLIYPNGSHG LVNVAKPLRS FFSSYLKSLP 300
  301 DVRKKSLSLP EKPNKEENSE VVIWKEFDRA KLYTADLESG LHYLLRVELA AHRSLAGAQL 360
  361 KTFKDFVTVI AKLFPGRPPV KKLLETLHEW LANLPLDKIP YNAILDLVNN KMQISGLFLT 420
  421 SHITWVGCQG SRLELRGYPC SLWKLFHTLT VQASTHPEAL VGTGFEGDPQ AVLQTMRRYI 480
  481 RTFFGCKECG EHFEEMAKES MDSVKTADQA VLWLWRKHNM VNSRLAGHLS EDPKFPKVPW 540
  541 PTPDLCPVCH EEIKGLDSWD EEQVLVFLKQ HYSRDNLVDT YSVDQGSPGE WEGMGRRQEE 600
  601 GKGLNPSGKA WGHQDTESLR PAHILGPRTD LSKSLHHRLD LRLQSPQGPQ TLEEAKAVVP 660
  661 FLGVGFSSLD MSLCVVLYVA SSLFLMIMYF FFRVRSKRWK VRLYHPAV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle