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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109465572, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAPAGSPHP AAGARMPPKL GGAVSGLAPP QQNGPAQSQM QVPSGYGLPH QNYMAPSGHY  60
   61 SQGPGKMTSL PLDNQCENYY SRPYTAPTQN VGTPSSANQP GAQLMYGRGP SAPHMGASMP 120
  121 GPFQGAPASA SHSYPSASQP YSSLGNRYSS PATYSATASV ASQGYPSTCS HYPISTVSNV 180
  181 VYPNVSYPSL PASEPYGQMF TSQSAPPPAR PLKESYSGPS TAVAYPSRPP PPPSQHQQQQ 240
  241 QQQQQQQQQS HSGYSSLPWS GPGLPPAQDS LIRNQMGSLA IPNSHPAINE NVQPPKPSSV 300
  301 VATVLPGPSS TRMPPAPSHP VGPVPSAPPP PEQMQTKGVD SSSTTSSASP LPNSYDALEG 360
  361 GSYPDMHSSS ASSPVPDRAP EPNSTLVPTP TAAQPAKVAK PFGYGYPTLQ PAYQNAAAPP 420
  421 TTAHPSGPAY SGYPQQYPGV HQLSSGLGGL SLQSSPQPES LRPVNLTQEK NILPATPIWA 480
  481 PVPNLSAELS KLNCSPDSFR CTLTSIPQTQ ALLNKAKLPL GLLLHPFRDL TQLPVITSNT 540
  541 IVRCRSCRTY INPFVSFIDQ RRWKCNLCYR VNDVPEEFLY NPLTRSYGEP HKRPEVQNST 600
  601 VEFIASSDYM LRPPQPAVYL FVLDVSHNAV EAGYLTVLCQ SLLENLDKLP GDSRTRIGFM 660
  661 TFDSTIHFYN LQEGLSQPQM LIVSDIDDVF LPTPDSLLVN LYESKELIKD LLNALPNMFI 720
  721 NTRETHSALG PALQAAFKLM SPTGGRVSVF QTQLPSLGAG LLQSREDPNQ RSSTKVVHHL 780
  781 GPATDFYKKL ALDCSGQQTA VDLFLLSSQY SDLASLACMS KYSAGCIFYY PSFHSTHNPS 840
  841 QAEKLQKDLK RYLTRKIGFE AVMRIRCTKG LSMHTFHGNF FVRSTDLLSL ANINPDAGFA 900
  901 VQLSIEESLA DTSLVCFQTA LLYTSSKGER RIRVHTLCLP VVSSLADVYA GVDVQAAICL 960
  961 LANMAVDRSV SSSLSDARDA LVNAVVDPLS AYSSAVSSVP RSTLTAPSSL KLLPLYVLAL1020
 1021 LKQKAFRTGT STRLDDRVYA MCQMKSQPLV HLMKMIHPNL YRIDRLTDEG AIHVNDRVVP1080
 1081 QPPLQKLSAE KLTREGAFLM DCGSVFYIWI GKGCDSNFIE NVLGYPDFGS IPQKMTHLPE1140
 1141 LDTLPSERTR SFVTWLRDSR PLSPVLHVVK DESPARTDFF QHLVEDRTEA ALSYYEFLIH1200
 1201 VQQQVCK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle