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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109466890
Protein type: Transmembrane
Type Confidence: 0.90
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSMAGSVLS CKNAQLARDF RECSMEGKVC VCCPPIPLHR PCPEWGQELK VAFNSTCDEA  60
   61 RGALKNLLFS VCGLTICAAI ICTLSAIVCC VQIFSLDLVH VQLAPERSVS GPLGSLACTS 120
  121 SPPAPLLHTM LDLEEFVPPV PPPPYYPPEY TCSSETDAQS ITYNGSMDSP VPLYPTDCPP 180
  181 SYEAVMGLRR DSQATLFDPQ LHDGSCVCER VPSIVDVSMD SGSLVLSAIG DLPGGSSPSE 240
  241 DSCLLELQGS VRSVDYVLFR SIQRSRAGYC LSLDCGLRGP FEDSPLPRRP PRAARSYSCS 300
  301 APEAPPPLGA PTAARSCHRL EGWPPWVGPC FPELRRRVPR GGSRSTAPPP ARAPVRRFSD 360
  361 SSGSLTPPGH RPPHRTPPPP LLLPRSHSDP GITTSSDIAD FRDLYTKVLE EEAASISSAD 420
  421 TGLCSEACLF RLARCPSPKL LRAHSAEKRR PVPTFQKVPL PSGPAPAHSL GDLKGSWPGR 480
  481 GLVTRFLQLS RKSPDPAGTG AHGHKQVRRS PWGRPGRESL HLRSCGDLSS GSSLRRLLSA 540
  541 RRLEHGIRPH SLSLNGGSRE TGL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle