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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109467046, gi...
Protein type: Transmembrane
Type Confidence: 0.95
Topology Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRLLGREAG TAADASVDGG HYTSVKWASD LVWAVPIWAN ATAFRKEPDD SKLGGKGGCR  60
   61 RTRATFGRTR VLRSRTKAGS VFQEGPPGVY VSCWDELEEE GTMAALLLLL PLLLLLPLLL 120
  121 KLDLWPQLRW LRADLAFTVR ALRCKRALRA RALAAAAADP ESPEGGCSLA WRLAHLAREQ 180
  181 PTRTFLIYGA RCFSYAEAES ESNRIARAFL RARGWTAGGR GSGRGSTEED ARVAPAAGDP 240
  241 AAGGTTAPPL APGATVALLL PAGPEFLWLW FGLAKAGLRT AFVPSALRRG PLLHCLRSCG 300
  301 ASAVVLATEF LESLEPDLPA LRAMGLHLWA TGPGTNLAGI SNLLSEAATQ VDEPVPGYLS 360
  361 APQNIMDTCL YIFTSGTTGL PKAARVSHLK VLQCQGFYQL CGVHQEDVIY LALPLYHMSG 420
  421 SLLGIVGCLG IGATVVLKPK FSASQFWEDC QRHGVTVFQY IGELCRYLVN QPPSKAECGH 480
  481 KVRLAVGSGL RPDTWDRFVR RFGPLQILET YGATEGNVAT FNYTGQQGAV GRASWLYKHI 540
  541 FPFSLIRYDV MTGEPIRNAQ GHCMAASPGE PGLLVAPVSQ ESPFLGYAGA PELAQEKLLK 600
  601 DVFRPGDIFF NTGDLLVCDE QGFLHFHDRT GDTFRWKGEN VATTEVAEVL EALDFLQEVN 660
  661 IYGVTVPGHE GRAGMAALAL RPPQALDLVQ LYTHVSENLP PYARPRFLRL QESLATTETF 720
  721 KQQKVRMANE GFDPSALSDP LYVLDQDKGA YLPLTPARYN ALLSGDLRI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle