YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|197245906, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.52
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRSEESTGT QSSEEQTGAL RCWRCRKCIA SSGCFMSPLE TQAVEDRHES VDAQNTCHLW  60
   61 HMNAEALPEW ISCLVQKAQW TVGKLNCPFC GARLGGFNFV STPKCSCGQL AAVHLCKSRT 120
  121 EHQATQAGRL TRPAPKCLPH PGVPSGCDKE TLLTGGGSKT RSHRLLSMAR NNNGLGRLTE 180
  181 ALCLEVRATY FEMKNEKLLF KTSDPKCQPF VPQPDTGRCT SRASHRKSHS LDLNISEKLI 240
  241 LLPTLYEIHS KPAAYPRVNE TGPIDLSGLA LPCSKSNCSF QNPPSFDPSM LLHRLSVAPH 300
  301 ETQAQRGREF QCGLEASSVY SDHAHANSLP FLMDLPSAGR SMLEASDQEE HLSPLDFLRS 360
  361 ASFPLGTINH RLNNRERNKL RTLRRQQRRR ERWLQKQGKY SGVGLLDHMT LSNEMSTDDE 420
  421 PEFTEEKDSY ICAVCLDVYF NPYMCYPCHH IFCEPCLRTL AKDNPASTPC PLCRTIISRV 480
  481 FLQTELNNAT KTFFTKEYLK IKQSFQKSSS AKWPLPSCRK GFHLFGGFHR RAAPVTRRQF 540
  541 PHGAHRMDYL HFEDDSRGWW FDMDMVIIYI YSVNWVIGFV VFCFLCYFFF PF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle