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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109460240, gi...
Protein type: Transmembrane
Type Confidence: 0.95
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDVTKKSMRD GTEVTERIVT ETVTTRLTSL PPKGSTSNGY TKTGSLGGGS RLEKQSLTHG  60
   61 SSGYINSSGS LRGNASTSSY RRAHSPASTL PNSPGSTFER KTHMSRHGTY EGSSSGNSSP 120
  121 EYPRKELASS STRGRSQTRE SEIRVRLQSA SPSTRWTELD EVKRLLKGSR SASASPTRNT 180
  181 SNTLPIPKKG TVETKTVTAS SHSVSGTYDS TILDSNFPPH MWSSTLPAGS SMGTYHNNIA 240
  241 TQSTSLVNTN AYSAGSVFGV PNNMASCSPT LHPGLSSCSS VFGMQNNLAP CSSVLSHGTT 300
  301 TASTAYGVKK NVPQPPTVTS TGVSTSAACT TSVQSDDLLH KDCKFLILEK DNVPAKKEME 360
  361 LLIMSKDSGK VFTASPASIS STSFSEDTLK KEKQAAYAAD TCLKADVNGD LNTVSTKSKA 420
  421 ISAENHSYDR GVGGGRGKSG VAGGGGGGGG GGSGGGTWGA APAWCPCGSC CSWWKWLLGL 480
  481 LLTWLLLLGL LFGLIALAEE VRKLKARVEE LEKTKVLYHD IVKTDRSSRD RLQGEAPSLG 540
  541 PGLSKAEMDD YGQEAIWLFV RNKLMTEQEN GNLRGSPGPK GDTGSQGPKG DRGLPGIPGT 600
  601 PGPLGHPGPE GPKGQKGSIG DPGMEGPIGQ RGLAGPMGPP GEPGPPGSGE KGDRGIAGEQ 660
  661 GPRGLPGVPG SPGLRGTSGS PGPQGPPGSV GPQGLRGEVG LPGVKGDKGL VGPPGPKGDQ 720
  721 GEKGPRGLTG EPGIRGLPGA VGEPGAKGAM GPAGPDGQQG SRGEQGLTGM PGARGPPGPT 780
  781 GDPGKPGLTG PQGPQGLPGT PGRPGTKGEP GAPGRVMTSE GSSAITVPGP PGPPGAMGPP 840
  841 GPPGTPGPAG PAGLPGQQGP RGEPGLAGDS FLNSGSSISE VLSAQGVDFR GPPGPPGPRG 900
  901 PPGPSIPGPP GPRGPPGEGV PGPPGPPGSF LTDSETFFSG PPGPPGPPGP KGDQGDPGVP 960
  961 GTPGIPGGLS HGTSSGTMYA QGPPGPPGPP GPPGSLSSSG QELQRYIAEY MQSDNIRTYL1020
 1021 SGVQGPPGPP GPPGPVITIT GETFDYSQLA SQVVSYLRSS GYGVGLSSAS SSEDILAMLR1080
 1081 RNDVWQYLRQ HLVGPPGPPG PPGVSGDGSL LSLDYGELSR HILNYMSSSG ISFGHPGPPG1140
 1141 PPGLPGTSYE ELLTMLRAAG LSSIAGPPGP PGPPGPRGPP GVSAALATYA AENSDNFRSE1200
 1201 LISYLTSPDV RSFIVGPPGP PGPQGPPGDY NWGSGSSARR GTSYSSSMGT GRTNGGSLGE1260
 1261 GGAFGAGDGG PYGTDVGPGG GYGAAAGGGV YGTNGESFRG SFTGDLDYNT LALRVSESMQ1320
 1321 RQGLLQGMAY TVQGPPGPQG PPGISKVFSA YSNVTQDLMD FFRTYGAIPG PPGQKGDMGT1380
 1381 PGPKGDRGPA GPRGPPGPPG PRGNKGEKGD KGDQVYTGRR KRSIAIKP

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