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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109463916, gi...
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.33
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARNWIMLVA NMDGPSYQLH AFECFQLIGI ALWNCVCCQF SMSLRDDVNT VLADSVLLKM  60
   61 SCGMSVRVVV PVSPVRVGTC GGRFPPLVPM NIMENSKEQE LQTLGSRVWD NPAYSSPPSP 120
  121 NGTPRICTVS SVALPETQPK KPEVRRQEKT PRVPVSGCCL LICRGIRGLW GTTLTENTAE 180
  181 NRELYVKTTL RELVVYIVFL VDVCLLTYGM TSSSAYYYTK VMSELFLHTP SESAVSFQTI 240
  241 SSMSDFWDFA QGPLLDSLYW TKWYNNQSLG SSSHSFIYYE NLLLGVPRLR QLRVRNDSCV 300
  301 VHEDFREDIL NCYDVYSPDK EDQLPFGPLN GTAWTYHSQN ELGGSSHWGR LTSYSGGGYY 360
  361 LDLPGSRQAS AEALQGLQEG LWLDRGTRVV FIDFSVYNAN INLFCILRLV VEFPATGGAI 420
  421 PSWQIRTVKL IRYVNNWDFF IVGCEVIFCI FIFYYVVEEI LEIRVHRFRY LSSVWNILDL 480
  481 VVILLSIVAV GFHVFRTLEV NRLMGELLQQ PDTYPDFEFL AFWQTQYNNM NAVNLFFAWI 540
  541 KIFKYISFNK TMTQLSSTLA RCAKDILGFA IMFFIVFFAY AQLGYLLFGT QVESFSTFVK 600
  601 CIFTQFRIIL GDFDYNAIDN ANRILGPVYF ITYVFFVFFV LLNMFLAIIN DTYSEVKEEL 660
  661 AGQRDQLQLS DLLKQSYSKT LQRLRLRKER VSDVQKVLKG GEPEIQFEDF TNTLRELGHA 720
  721 EREISEVSAA FTRFDRDGDH ILDEEDQAQM RQGLEEERMT LSAETENLGR SVGHSPPGEL 780
  781 DAEAARGRSW VSGEEFDMLT RRVLQLQRVL EGVVSQVDAL SSKLKMLERK GELAPSPGME 840
  841 EPAVWENPYN PS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle