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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|198041599, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.95
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGPSSPTTRG QGRRRGPPPL PLLLPLSLLL LRAQLAVGNL AGGSPSAAEA PGSAQVAGLC  60
   61 GRLTLHRDLR TGRWEPDPQR SRRCLLDPQR VLEYCRQMYP ELHIARVEQA AQAIPMERWC 120
  121 GGTRSGRCAH PHHEVVPFHC LPGEFVSEAL LVPEGCRFLH QERMDQCESS TRRHQEAQEA 180
  181 CSSQGLILHG SGMLLPCGSD RFRGVEYVCC PPPATPNPSG MAVGDPSTRS WPLGGRAEGG 240
  241 EDEEEVESFP QPVDDYFVEP PQAEEEEEEE EERAPPPSSH TPVMVSRVTP TPRPTDGVDV 300
  301 YFGMPGEISE HEGFLRAKMD LEERRMRQIN EVMREWAMAD SQSKNLPKAD RQALNEHFQS 360
  361 ILQTLEEQVS GERQRLVETH ATRVIALIND QRRAALEGFL AALQGDPPQA ERVLMALRRY 420
  421 LRAEQKEQRH TLRHYQHVAA VDPEKAQQMR FQVQTHLQVV QERMNQSLGL LDQNPHLAQE 480
  481 LRPQIQELLH AEHLGPSELE ASVPGSSSED KDAPVTLPKG STDQESSSSG REKLTPLEQY 540
  541 EQKVNASAPR GFPFHSSDIQ RDELAPAGTG VSREALSGLL IMGAGGGSLI VLSLLLLRKK 600
  601 KPYGTISHGV VEVDPMLTLE EQQLRELQRH GYENPTYRFL EERP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle