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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109461524
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRPGLGCHC PLLLLLLLPA ATSASGPSSS PSPIQAVEDA VVPGHQAGAA ACRCCLAQTP  60
   61 RSSHCTRASC RVRSCPPGRC TDQQGCLTPT PSVPSPSRSP VEKRQVSLNW QPLTLQEARA 120
  121 LLRQRRPRGP WARALLKRRP PHRAPAGQAR VLCPLICHNG GVCVKPDRCL CPPDFAGKFC 180
  181 QLHSSGARPP APAMPGLTRS VYTMPLANHR DDEHGVASMV SVHVEHPQEA SVVVHQVERV 240
  241 SGPWEEANSE ALARAEAAAR AEAAAPYTVL AQSAPREDGY SDASGFGYCF RELRGSECAS 300
  301 PLPGLRTQEV CCRGEGLAWG VHDCHPCAEH LGNSNRVSGP NGLCPTGFER VNGSCVDVDE 360
  361 CATGGRCQHG ECANTRGGYT CVCPDGFLLD SSRSSCISQH VISEAKGPCY RVLQDGGCSL 420
  421 PILRNITKQI CCCSRVGKAW GRGCQLCPPY GSEGFREICP AGPGYHYSAS DLRYNTRPLN 480
  481 PDPPRVTFNQ PRAPPVTLRP PTGFLPTRRP EPRPDPGPQP ELRPRPEPQP RPEFPLPSIP 540
  541 AWTGPEIPES GTSSSMCQRN PQVCGPGRCV SRPGGYTCAC DPGFRLGPQG TRCIDVDECR 600
  601 RVPTPCAPGR CENTPGSFRC VCGTGFRAGP RATECLDVDE CRRVPPPCDR GRCENTPGSF 660
  661 LCVCPAGYQA APHGASCQDV DECTQSPGLC GRGACENLPG SFRCVCPAGF LGSACEEDVD 720
  721 ECAQQPPPCG PGRCDNTLGS FHCACPAGFR SRGPGAPCQD VDECARSPSP CAYGRCENTE 780
  781 GSFKCVCPTG FQPNAAGSEC EDVDECENHL ACPGQECVNS PGSFQCRACP VGYHLHRGRC 840
  841 TDVDECNSGT PCGLHGQCTN AQGSFHCSCS TGYRAPSGRP GPCADINECL EGDFCFPHGE 900
  901 CLNTDGSFTC TCAPGYRPGP RGASCLDVDE CSEEDLCQSG ICTNTDGSFE CICLDIDECR 960
  961 ERGPALCGSQ RCENSPGSYR CVRDCDPGYH PGPEGTCDDV DECREYGSAI CGAQRCENTP1020
 1021 GSYRCTPACD PGYQPTPGGG CQDVDECRNR SFCGAHAMCQ NLPGSFQCVC DQGYEGARDG1080
 1081 RHCVDVNECE TLQGVCGSAL CENVEGSFLC VCPTSPEEFD PMTGRCVPPR TPAGTFPGSQ1140
 1141 PQAPASPSLP ARPPAPPPPR RPSPPRQGPV SSGRRECYFD TAAPDACDNI LARNVTWQEC1200
 1201 CCTVGEGWGS GCRIQQCPGT ETAEYQSLCP HGRGYLVPSG DLSARRDVDE CQLFQDQVCK1260
 1261 SGVCVNTAPG YSCYCNNGFY YHAHRLECVD NDECADEEPA CEGGRCVNTV GSYHCTCEPP1320
 1321 LVLDGSRRRC VSNESQSLDD NLGVCWQEVG PDLVCSRPRL DRQATYTECC CLYGEAWGMD1380
 1381 CALCPAQDSD DFEALCNVLR PPAYGPPRPG GFGLPYEYGP DIGPPYQSLP YGPDLYPPPV1440
 1441 LPYDPYPPPP GPFARREAPY GAPPFEMPDF EDDGDPYGET EAPDPPSRGT GWPYRSRDTR1500
 1501 GSFPEPEESS ERGSYTGALS EPYEGLEAEE CGILDGCAHG RCVRVPEGFT CDCFDGYRLD1560
 1561 ITRMSCVDIN ECDEAEATSP LCVNARCVNT DGSFRCICRP GFAPTHQPHH CAPARPRA

YRC Informatics Platform - Version 3.0
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