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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109460559
Protein type: Globular with Signal Peptide
Type Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKDRKASQLA GVSLLAVKTE PLHSSETTTT TGDGALDTFT GSVITSSGYS PRSAHQYSPQ  60
   61 LYPSKPYPHI LSTPAAQTMS AYAGQTQYSG MQQPAVYTAY SQTGQPYSLP AYDLGVMLPA 120
  121 IKTESGLPQT QSPLQSGCLS YSPGFSTPQP GQTPYSYQMP GSSFAPSSTI YANNSVSNST 180
  181 NFSGSQQDYP SYTAFGQNQY AQYYSASTYG AYMTSNNTAD GTSSSTSTYQ LQESLQGLTS 240
  241 QPDSTMLGEF DTVQSPSTPI KDLDDRTCRS SGSKSRGRGR KNNPSPPPDS DLERVFVWDL 300
  301 DETIIVFHSL LTGSYAQKYG KDPPMAVTLG LRMEEMIFNL ADTHLFFNDL EECDQVHIDD 360
  361 VSSDDNGQDL STYSFATDGF HATASSANLC LPTGVRGGVD WMRKLAFRYR RVKELYNTYK 420
  421 NNVGGLLGPA KRDAWLQLRA EIEGLTDSWL TNALKSLSII STRSNCVNVL VTTTQLIPAL 480
  481 AKVLLYSLGG AFPIENIYSA TKIGKESCFE RIMQRFGRKV VYVVIGDGVE EEQAAKKHNM 540
  541 PFWRISSHSD LLALHQALEL EYL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle