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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109459754
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDQPSRTDES YYETHSGSLD PSHHFHPPSS YPYPHPTLYR PSLGGVLHHE SPQHGVSPQP  60
   61 SQQHAGFYQQ NESQHLRGSD FHDSAFPHHS YHQDRAHFST SPTNVPHTYG GPHPLAESQH 120
  121 SGGPQDGSHI ESYHSHQGNP RKPSVALSHP SSIGSHQGKT HHHYERPQYL DPRQSRRQSD 180
  181 LSDNLSHRSG EEYQNQERSG LQVGQQQEGQ RASSKRGEHR RRRGDYLKYK DRIRHRRPSA 240
  241 SQLSHKSHST EGTSPSHMRS KSLASMPQSH LGVQSYVSSQ VHSGDSLKES VSWSDEDHVQ 300
  301 KRKKAQRTHK KAHSGNVFHL IWEKISQLLL GLRQMLLTLT QSLCFETFIF LVVCLNTIVL 360
  361 VAQTFTELEI RGEWYFMVLD SIFLSIYVIE AFLKLIALGM EYFYDPWNNL DFFIMVMAAL 420
  421 DFVLLQINSL SYSFYNHSMF RILKVFKSMR ALRAIRVLRR LSILTSLHEV TGTLSGSLPS 480
  481 ITAILSLMFT CLFLFSVVLR ALFQESDPKR FNNIFTTLFT LFTMLTLDDW SLIYIDNRAQ 540
  541 GAWYIIPILV IYIIIQYFIF LNLVIAVLVD NFQMALLKGL EKVKQEQAAR VHEKLLDDSL 600
  601 TDLNKADPDA QMTEETLKTQ LIERMFGNMT EKQRKLHFQF LQLVAAVELH QQKFRSQAFV 660
  661 IDELVDTAFE AGDDDFGK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle