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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109458418
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRPGLGCHC PLLLLLLLPA ATSASGPSSS PSPIQAVEDA VVPGHQAGAA ACRCCLAQTP  60
   61 RSSHCTRASC RVRSCPPGRC TDQQGCLTPT PSVPSPSRSP VEKRQVSLNW QPLTLQEARA 120
  121 LLRQRRPRGP WARALLKRRP PHRAPAGQAR VLCPLICHNG GVCVKPDRCL CPPDFAGKFC 180
  181 QLHSSGARPP APAMPGLTRS VYTMPLANHR DDEHGVASMV SVHVEHPQEA SVVVHQVERV 240
  241 SGPWEEANSE ALARAEAAAR AEAAAPYTVL AQSAPREDGY SDASGFGYCF RELRGSECAS 300
  301 PLPGLRTQEV CCRGEGLAWG VHDCHPCAEH LGNSNRVSGP NGLCPTGFER VNGSCVDVDE 360
  361 CATGGRCQHG ECANTRGGYT CVCPDGFLLD SSRSSCISQH VISEAKGPCY RVLQDGGCSL 420
  421 PILRNITKQI CCCSRVGKAW GRGCQLCPPY GSEGFREICP AGPGYHYSAS DLRYNTRPLN 480
  481 PDPPRVTFNQ PRAPPVTLRP PTGFLPTRRP EPRPDPGPQP ELRPRPEPQP RPEFPLPSIP 540
  541 AWTGPEIPES GTSSSMCQRN PQVCGPGRCV SRPGGYTCAC DPGFRLGPQG TRCIDVDECR 600
  601 RVPTPCAPGR CENTPGSFRC VCGTGFRAGP RATECLDVDE CRRVPPPCDR GRCENTPGSF 660
  661 LCVCPAGYQA APHGASCQDV DECTQSPGLC GRGACENLPG SFRCVCPAGF LGSACEEDVD 720
  721 ECAQQPPPCG PGRCDNTLGS FHCACPAGFR SRGPGAPCQD VDECARSPSP CAYGRCENTE 780
  781 GSFKCVCPTG FQPNAAGSEC EDVDECENHL ACPGQECVNS PGSFQCRACP VGYHLHRGRC 840
  841 TDVDECNSGT PCGLHGQCTN AQGSFHCSCS TGYRAPSGRP GPCADINECL EGDFCFPHGE 900
  901 CLNTDGSFTC TCAPGYRPGP RGASCLDVDE CSEEDLCQSG ICTNTDGSFE CICPPGHRAG 960
  961 PDLASCLDID ECRERGPALC GSQRCENSPG SYRCVRDCDP GYHPGPEGTC DDVDECREYG1020
 1021 SAICGAQRCE NTPGSYRCTP ACDPGYQPTP GGGCQDVDEC RNRSFCGAHA MCQNLPGSFQ1080
 1081 CVCDQGYEGA RDGRHCVDVN ECETLQGVCG SALCENVEGS FLCVCPTSPE EFDPMTGRCV1140
 1141 PPRTPAGTFP GSQPQAPASP SLPARPPAPP PPRRPSPPRQ GPVSSGRREC YFDTAAPDAC1200
 1201 DNILARNVTW QECCCTVGEG WGSGCRIQQC PGTETAEYQS LCPHGRGYLV PSGDLSARRD1260
 1261 VDECQLFQDQ VCKSGVCVNT APGYSCYCNN GFYYHAHRLE CVDNDECADE EPACEGGRCV1320
 1321 NTVGSYHCTC EPPLVLDGSR RRCVSNESQS LDDNLGVCWQ EVGPDLVCSR PRLDRQATYT1380
 1381 ECCCLYGEAW GMDCALCPAQ DSDDFEALCN VLRPPAYGPP RPGGFGLPYE YGPDIGPPYQ1440
 1441 SLPYGPDLYP PPVLPYDPYP PPPGPFARRE APYGAPPFEM PDFEDDGDPY GETEAPDPPS1500
 1501 RGTGWPYRSR DTRGSFPEPE ESSERGSYTG ALSEPYEGLE AEECGILDGC AHGRCVRVPE1560
 1561 GFTCDCFDGY RLDITRMSCV DINECDEAEA TSPLCVNARC VNTDGSFRCI CRPGFAPTHQ1620
 1621 PHHCAPARPR A

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