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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109458087
Protein type: Globular with Signal Peptide
Type Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVSLKIRFC SHFIFLLSSY LTSYRGGDLQ DYKAHVIAKF DTSVDLHCDG PEMKVLSDAF  60
   61 KPHQKTFRPH TIILHGRPGV GKSALARSII LGWAQGKLYQ DMSYVFLFSV REMKWTEKSS 120
  121 LAQLMANEWP HSQAPVTKIM SQPERLLFVI DGLDDMDSAL QHDDMTLSRD WKDKQPIYIL 180
  181 VYSLLRKALL SQSFLIITTR NTGLENLRSM VVSPLYILVE GLSASRRSQL VLENIPDDHQ 240
  241 KIQVFHSVIE NHQLFDQSQA PSFCSLVCEA LQLQEKLGKR CTLPCQTLTD LYATLVFHQL 300
  301 TSRGPSQRAL SKEEQITLVG LCRMALEGVW TMRSVFYDDD LKSYSLKQSE ISALFHVNIL 360
  361 LQVGHSSEQC YVFFDLSLQD FFAALYYVLE GLGEWNQYFS YITNQRNIME VKRSSDSHLL 420
  421 EMKRFLFGLM NKDTLKTVEV LFRCPVTPPI KQKLQHCLSL IGQQVNGSSP MDTLDAFYYL 480
  481 FESQDEEFVH MALKSFQEVW LLINQKMDLM VSSYCLQQCQ NLKAIRVDIS DLFSVDNTPK 540
  541 LCPVALQKTQ CKPLIIEWWE NFCTVLSTHP NLKTLDLGHS ILNEWSMKIL CLKLRNSSCS 600
  601 IQNLTFKNSE VVSGLQYLWM LLVSNRNLKY LNLGNTPMKD DDIKLACEAL KHPSCSLETL 660
  661 RLDSCELTLT GYELISKLLL SASSLKCLSL ARNKVGVKSM TSLGEALSSS TCTLQKLILN 720
  721 ECFVSPFPTN AVLPALKILS KHNLSHLCQV LSLSISVLCS ILGNPVCLSR SLLLNHCNII 780
  781 KDAYGFLALI LANNRKLTHL SLTMNPVGNS AMKLLCEALK EPTCYLQDLE LVDCQLTENC 840
  841 CEDLACMITT TKHLQSLDLG NNALGDKGVI TLCKGLKQSS SSLRRLGLAA CGLTSKCCEV 900
  901 LSSALSCNPY LNSLNLVRND FNTSGMLKLC SAFQNPASNL WIIGLWKQQF YAQVRRQLEE 960
  961 VQFIKPHVVI DGDWYSIDED DRNWWKN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle