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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109123340
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGQSGRSRHQ KRARAQAQLR NLEAYAANPH SFVFTRGCTG RNIRQLSLDV RRVMEPLTAS  60
   61 RLQVRKKNSL KDCVAVAGPL GVTHFLILSK TETSVYFKLM RLPGGPTLTF QVKKYSLVRD 120
  121 VVSSLRRHRM HEQQFAHPPL LVLNSFGPHG MHVKLMATMF QNLFPSINVH KVNLNTIKRC 180
  181 LLIDYNPDSQ ELDFRHYSIK VVPVGASRGM KKLLQEKFPN MSRLQDISEL LATGAGLSES 240
  241 EAEPDGDHNI TELPQAVAGR GNMRAQQSAV RLTEIGPRMT LQLIKVQEGV GEGKVMFHSF 300
  301 VRKTEEELQA ILEAKEKKLR LKAQRQAQQA QNVQRKQEQR EAHRKKSLQG MKKARVGGGD 360
  361 EEASGIPSRT ASLGLGEEDD DQEDDDIEYF CQAVGEAPSE DLFPEAKRKR PAKSPGRKRR 420
  421 ETDRGRDAKS CPANFSAAAD HILSGFQEDF LWPILVVQFL VALASNGLAL YRFSTREQRP 480
  481 WYPAVVFSVQ LAVSDLLCAL TLPPLAAYLY PPKHWRYGEA ACRLERFLFT CNLLGSVIFI 540
  541 TCISLNRYLG IVHPFFTRSH LRPKHAWAVS AAGWVLAALL AMPTLSFSHL KRPQQGVGNC 600
  601 IVARPEACIK CLGTAGHRLE AYRAYSLVLA GLGCGLPLLL TLAAYGALGR AVLRSSSMTV 660
  661 AEKVRVAALV ASGVALYASS YVPYHVMRVL NVDARRRWST RCPSFADVAQ ATAALELGPY 720
  721 VGYQVMRGLM PLAFCVHPLL YMAAVPSLGC CCRHCPGYKD SWNPEDAKNT GQALPLNATA 780
  781 ASKPSEPQSH ELSP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle