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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109109354
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLGIKEVDKG LPSRGRAPAR AGGVGERCRG DGEGLSDHHR GRLPHLQDQS RGEEPPPGPA  60
   61 GAGSRVSQAL GDFPSGCNQV WRLVVYFLQW EFLAVGQLCV PRWAGVTDLQ IFLDLPWGPA 120
  121 APPVFQQLLL VRQLRAVTGQ RESSRSFLVA ADLTREGLWS VPCLSRALIP NLPPGSHSSL 180
  181 PCLSGLELSC CVSGPSGQDL TKVGQQEEAV IVTWPLSAFM KVNGLEEGVE FLPVNNVKKV 240
  241 EKRGPGRWVV LAAVLIGLLL VSLGIGFLVW HLQYRDVRVQ KIFNGYLRIT NENFLDAYEN 300
  301 SNSTEFVSLA SKVKDALKLL YSGVPFLGPY HKESAVTAFS EGSVIAYYWS EFSIPQHLVE 360
  361 EAERVMAEER VVMLPPRARS LKSFVVTSVV AFPTDPKTVQ RTQDNSCSFA LHARGVEVMR 420
  421 FTTPGFPDSP YPAHARCQWA LRGDADSVLS LTFRSFDLAS CDERGSDLVT VYNTLSPMEP 480
  481 HTLVQLCGTY PPSYNLTFLS SQNVLLITLI TNTERRHPGF EATFFQLPKM SRCGGHLRKA 540
  541 QGTFNSPYYP GHYPPNIDCT WNIEVPNNQH VKVRFKFFYL LEPGVPTGTC PKDYVEINGE 600
  601 KYCGERSQFV VTSNSNKITV RFHSDQSYTD TGFLAEYLSY DSSDPCPGQF TCRTGRCIRK 660
  661 EMRCDGWADC TDYSDELNCS CDATHQFTCK NKFCKPLFWV CDSVNDCGDY SDEQGCSCPA 720
  721 QTFRCSNGKC LSKSQQCDGK DDCGDGSDEA SCPKVNVVTC TKHTYRCLNG LCLSKGNPEC 780
  781 DGKKDCSDGS DEKDCDCGLR SFTRQARVVG GTDADEGEWP WQVSLHALGQ GHVCGASLIS 840
  841 PNWLVSAAHC YIDDRGFRYS DPTQWTAFLG LHDQSQRSAP EVQERRLKRI ISHPSFNDFT 900
  901 FDYDIALLEL EKPVEYSSVV RPICLPDASH VFPAGKAIWV TGWGHTQYGG TGALILQKGE 960
  961 IRVINQTTCE SLLPQQITPR MMCVGFLSGG VDSCQGDSGG PLSSVEADGR IFQAGVVSWG1020
 1021 DGCAQRNKPG VYTRLPLFRD WIKEKTGV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle