YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|108742092, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLTRLFRIHG LFVASHPWEV IVATVTLTIC MMSMNMFTGN NQICGWNFDC PKLDEQILSS  60
   61 DIIILTITRC IAIVYIYFQF QNLRQLGSKY ILGIAGLFTI FSSFVFSTVV IHFLDKELTG 120
  121 LNEALPFFLL LIDLSKACAL AKFALSSNSQ DEVRENIAKG MAVLGPTFTL DALVECLVIG 180
  181 VGTMSGVRQL EIMCCFGCMS VLANYFVFMT FFPACVSLVL ELSRESREGR PIWQLSHFAR 240
  241 VLEEEEDNKP NPVTQRVKMI MSLGLVMVHA HSRWIADPAS SDGTLDLPEV GMSLNENLPK 300
  301 RIEPDMPLWH FYLSRMISID IEQVITLGLA LFLAVKYIFF EQVEMESTLS LKVPTPSSML 360
  361 TQKWSPDQCC RKEIPYSTKL DKPPTPPPVV TKEERDLVIR PLPAPKEPEQ KSTFVLGEDE 420
  421 TQENTHVPEP VMSLPAEPRP VEDCLSILKN PDMGARYLSD EEVIVLVNSK HIPAYKLEAM 480
  481 METPERGVMI RRKMLSPKFP EPSTLSCLPY KDYDYSKVMG TCCENVIGYM PVPVGVAGPL 540
  541 LLDGKQFQVP MATTEGCLVA STNRGCRAIA LAGGASSRVL ADGMTRGPVV RFPSACQAAE 600
  601 VKAWLESPEG FKTIKEAFDQ TSRFARLEKL LIGLASRNLY IRFQSRTGDA MGMNMISKGT 660
  661 EQALARLKEE FPELQVLAVS GNYCTDKKPA AINWIEGRGK SVVCETTIPA KVVKEILKTS 720
  721 TEALVDVNIS KNLVGSAMAG SIGGYNAHAA NIVAAIYIAC GQDPAQTVGS SNCITLMEAS 780
  781 GATGEDLYIS CTMPSIELGT VGGGTNLPPQ QACLKMLGVL GASQECPGEN ARQLAKVVCA 840
  841 TVLAGELSLM SALAAGHLVK SHMTHNRSKV NLQEAPGTCT KQAS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle