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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|76880917
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTEGAIYTCP MHPQVRQIGP GNCPICGMAL EPEVITAETG PSPEFVDMRR RFWIGFVLTL  60
   61 PVLALEMGGH LTNLHMLLGA QTSNWLQLVF STPVVLWAGA PFFERAWRSL VTRRLNMFTL 120
  121 IAMGTGVAWV YSVVATVAPG QFPATFRSAD GAVPIYFEAA AVITVLVLLG QVLELRAREQ 180
  181 TGGAIRALLD LAPKTARRIR NDGTDEDVPL EAVAVGDRLR VRPGEKVPVD GALVEGRSSV 240
  241 DESMITGESM PVTKELGAKL IGGTMNKTGG FVMEAGKVGR DTMLSRIVQM VAEAQRSRAP 300
  301 IQRLADEVSG WFVPAVILIA TVAFATWMWL GPQPSFTHGL VAAVAVLIIA CPCALGLATP 360
  361 MSIMVGVGQG ARAGVLIKNA EALERFEKVN TLVVDKTGTL TEGKPKVTSV VTVNAIAEDE 420
  421 LLQVAATLER ASEHPLAAAI VEAANERGLG LGTAENFDSP VGKGVTGTVK GHRLVIGSHQ 480
  481 IMSEEKVDVA PLTEKAEALR GEGATVIFVA IDGRVGGLFA ISDPIKPTTP AAVAALMKDG 540
  541 VRVVMLTGDN RTTANAVARK LGITEVEAEI LPEHKSEIVR RLRNEGRIVA MAGDGVNDAP 600
  601 ALAAADVGIA MGTGTDVAIE SAGVTLLKGD LQGIVRARQL SHATMRNIRQ NLFFAFIYNA 660
  661 AGVPVAAGVL YPAFGLLLSP IIAAAAMALS SVSVIGNSLR LRSTRI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle