YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|95020434
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSAGANMAA ALRAAGALLR QPLAHGSSRA CQPWRCQSGA AAAATTEKVH HAKTAKPQAQ  60
   61 PERRKPKTGI LMLNMGGPET LGEVQDFLQR LFLDRDLMTL PIQNKLAPFI AKRRTPKIQE 120
  121 QYRRIGGGSP IKMWTSKQGE GMVKLLDELS PDTAPHKYYI GFRYVHPLTE EAIEEMERDG 180
  181 LERAIAFTQY PQYSCFTTGS SLNAIYRYYN EMGRKPTMKW STIDRWPTHP LLIQCFADHI 240
  241 LKELDHFPRE KRSEVVILFS AHSLPMSVVN RGDPYPQEVG ATVHKVMEEL GYPNPYRLVW 300
  301 QSKVGPVPWL GPQTDEAIKG LCERGRKNIL LVPIAFTSDH IETLYELDIE YSQVLAKKCE 360
  361 AENIRRAESL NGNPLFSKAL ADLVYSHIQS NKLCSTQLTL SCPLCVNPVC RETKSFFTSQ 420
  421 QL

Type	Start	End	Confidence
Signal Peptide	1	26	0.94
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	422	0.99