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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|113611712, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.08
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPLLLGFLC LLLFAGQVAV VASDDDREVL VELKRFLQAN NRFNRGEYDR WPESDASPCR  60
   61 WAGVTCDGRG RVTALDLSGS AISGAAFGNF SRLTALTWLD LSDNGIGGEL PAGDLAQCRG 120
  121 LVHLNLSHNL IAGGLDVSGL TKLRTLDVSG NRFVGGAAAS FVPAACGDLA VLNVSGNGFT 180
  181 GDITGLFDGC PKLEYIDLST NNFTGELWPG IARFTQFNVA ENNLTGGVPA ATFPGGCKLR 240
  241 SLDLSANHFA GEFPDSIASC SNLTYLSLWG NGFAGKISAG IGELAGLETL ILGKNRFDRR 300
  301 IPPELTNCTS LQFLDMSTNA FGGDMQGILG EFVTLKYLVL HHNNYTGGIV SSGVLRLPLL 360
  361 ARLDLSFNQF SGELPLEVAD MKSLKYLMLP ANSFSGGIPP EYGRLAELQA LDLSYNGLTG 420
  421 RIPASIGNLT SLLWLMLAGN QLSGEIPPEI GNCSSLLWLN LADNRLTGRI PPEMAEIGRN 480
  481 PAPTFEKNRK DVSVLAGSGE CQAMRRWIPA TYPPFNFVYT VMTRENCRSI WDRLLKGYGI 540
  541 IPICTNSSSP VRSNTISGYV QLSGNKLSGE IPSQIGAMRN LSLLHLDNNQ LTGRLPPAIS 600
  601 HLPLVVLNVS NNSISGGIPP EIGHILCLEI LDLAYNNFSG ELPASLGNLT GLNKFNVSYN 660
  661 PLLSGDVPTT GQLGTFDELS FLGDPLITLQ DRGPRRQRAP QAAIRGRGMS PRTIALWFVF 720
  721 SLIIAFIAGT VVFIMANLRA RFPVDQDPDP ESLSCENPKC GGGGGGGGKC GAFHMSATSS 780
  781 PPSGCSSSCV TGCSSSSEGV KVFRLDKTAF TYRDIVAATS GFSDDRVVGR GGYGVVYRGV 840
  841 LPDGRDVAVK KLARLRDCGG GGGGEDSGER EFRAEMEVLA DRMGFTWPHP NLVTLYGWCL 900
  901 AGSAKILVYE YLDGGNLESL IGDHAAFGRR RRLDAAIGVA RALVFLHHEC RPAVVHRDVK 960
  961 ASNVLLGRDG GVKVTDFGLA RVVRPGDTHV STMVAGTVGY VAPEYGQTWR ATTKGDVYSY1020
 1021 GVLLMELATG RRAVDGGEEE CLVEWSRRMA QEGWPAREAA ASSGAVLWDM LMLGMRCTAD1080
 1081 SPQERPDMPD VLAALLDIAG SGGGGE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle