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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: FTSH8_ORYSJ
Protein type: Globular with Signal Peptide
Type Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLASLARAL SRRSAPSSSR ARQGFSLGGL GGTTRSPPPP SSPLPSLHGG EGGGLGLGFV  60
   61 RGYLTAALGR PAAVKAGTDW RSILANPQFR RLFSDGSKKN YENYYPKGKK EAPKGDGSNK 120
  121 SDSKQDSSTD DQWNFQETAS KQLQNFLAPL LFLGLMLSSL SSSSSDQKEI SFQEFKNKLL 180
  181 EPGLVDRIVV SNKSVAKVYV RSSPQSNSQG QNTDAIITTN DVPSKHTPSR YKYYFNIGSV 240
  241 DSFEEKLEEA QEALGVDPHD FVPVTYVAEV NWFQEVMRFA PTVFLVGLIY LMSKRMQSGF 300
  301 NIGGGPGKGG RGIFNIGKAQ VTKMDKNSKN KVFFKDVAGC DEAKQEIMEF VHFLKNPKKY 360
  361 EELGAKIPKG ALLVGPPGTG KTLLAKATAG ESGVPFLSIS GSDFMEMFVG VGPSRVRNLF 420
  421 QEARQCAPSI IFIDEIDAIG RARGRGGFSG SNDERESTLN QLLVEMDGFG TTSGVVVLAG 480
  481 TNRPDILDKA LLRPGRFDRQ ITIDKPDIKG RDQIFRIYLK KLKLDNEPSF YSQRLAALTP 540
  541 GFAGADIANV CNEAALIAAR SEETQITMQH FESAIDRIIG GLEKKNKVIS KLERRTVAYH 600
  601 ESGHAVAGWF LEHAEPLLKV TIVPRGTAAL GFAQYVPNEN LLMTKEQLFD MTCMTLGGRA 660
  661 AEEVLIGRIS TGAQNDLEKV TKMTYAQVAV YGFSEKVGLL SFPQRDDGFE MTKPYSNQTA 720
  721 SIIDDEVREW VGKAYKKTVE LITEHKEQVA KIAEMLLEKE VLHQDDLVRV LGERPFKASE 780
  781 PTNYDLFKQG FQDEEDSKNQ EAAKTPQPDD DGTPSLGEVV PT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle