YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|113533431, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATRRALTSV LRSASRLRAA SPSPCPRRAP LHPHRRPSPA GFLLNRAAAA YASSAAAQAA  60
   61 PAPPPASGKA TGGGKITDEF TGAGAVGQVC QVIGAVVDVR FDEGLPPILT ALEVLDHNIR 120
  121 LVLEVAQHLG ENMVRTIAMD GTEGLVRGQR VLNTGSPITV PVGRATLGRI MNVIGEPIDE 180
  181 KGDITTNHFL PIHREAPAFV EQATEQQILV TGIKVVDLLA PYQRGGKIGL FGGAGVGKTV 240
  241 LIMELINNVA KAHGGFSVFA GVGERTREGN DLYREMIESG VIKLGDKQSE SKCALVYGQM 300
  301 NEPPGARARV GLTGLTVAEH FRDAEGQDVL LFIDNIFRFT QANSEVSALL GRIPSAVGYQ 360
  361 PTLATDLGGL QERITTTKKG SITSVQAIYV PADDLTDPAP ATTFAHLDAT TVLSRQISEL 420
  421 GIYPAVDPLD STSRMLSPHV LGEDHYNTAR GVQKVLQNYK NLQDIIAILG MDELSEDDKL 480
  481 TVARARKIQR FLSQPFHVAE VFTGAPGKYV ELKESVQSFQ GVLDGKYDDL PEQSFYMVGG 540
  541 IDEVIAKAEK IAKESAS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle