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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|169776545
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.78
Topology Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNMKYFCDHC LILSGFSGWW VSLSTLSVSA KTLNYEWNIT WVLANPDGLQ ERPVIGINGQ  60
   61 WPLPVLNLTL GDRVIAKVYN ALGNESTSIH WHGFFQNGTT HMDGAPSVTQ CDIAPGSTFV 120
  121 YNFTVNQTGT YWYHSHARGQ YPDGLRQALV IRGPDEPYSG QYDEERVITL SEWYHDPMPT 180
  181 LLKQFISVTN PTGAEPVPKS ALMNDTQNLT IAVEPGKTYL FRLVNVAAFA SQYFWIEDHT 240
  241 MKIVEVDGVW TEPAEASMIY ITAAQRYSFL VTMKNDTNKN YAIVGSMDTD LFDTLPPTLN 300
  301 YNVTGWLVYD NKAERPAPTD ISSFDPYDDF KLVPVDGERL LGDPDYTVTL DLTMDNLGDG 360
  361 ANYAFFNGIT YVMPKVPTLY TALSTGSAAT NSTVYGYNTN AFILDKGDVI DLVLNNDDTG 420
  421 KHPFHLHGHN FQVVARSDED AGHYDANNHS AFPSVPMRRD TIYVKPTGYF VIRFRADNPG 480
  481 VWIFHCHIEW HMDAGLAVVL IEAPLDLQQT LAIPEDHWQA CDASDTLKRG NAAGNTKDFY 540
  541 DLTGANTSVS PLPAGFTARG IVALVFSCIA AILGLISIVW YGMAPITVKQ SSTDERREVD 600
  601 SN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle