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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|92899277
Protein type: Globular with Signal Peptide
Type Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFGASKAVF QVLSSVVPQS GGYNEPFVNT SQLLTKYMKK KSSRHRFLIE SSGMLQSQLR  60
   61 PHRFPLTSVS FCDYKTYSHP WLQTCKCQKA ENVSGITSGD GNGSRFASDV EKSSLVSNVM 120
  121 SAKSSLEFED VQLLEQEKEV LSSNVTNGTV TKNLGTISLN SIEEEAWDLL RESVVNYCGN 180
  181 PIGTIAAKDP NSTNVLNYDQ VFIRDFIPSG VAFLLKGEYD IVRNFILHTL QLQSWEKTMD 240
  241 CHSPGQGLMP ASFKVRTVPL EGDDSATEEV LDPDFGEAAI GRVAPVDSGL WWIILLRAYG 300
  301 KCSGDLSVQE RVDVQTGIKM ILKLCLADGF DMFPTLLVTD GSCMIDRRMG IHGHPLEIQA 360
  361 LFYSALRCAR EMLTPEDGSA DLIRALNNRL VALSFHIREY YWIDMKRLNE IYRYKTEEYS 420
  421 YDAVNKFNIY PDQISPWLVE WMPNKGGYLI GNLQPAHMDF RFFSLGNLWS VVSSMATEEQ 480
  481 SHAILDLIEA KWSDLVADMP LKICYPALEG QEWQIITGSD PKNTPWSYHN GGSWPSLLWQ 540
  541 LTAACIKMNR PHIAAKAVEI AERRISRDKW PEYYDTKRSR FIGKQSQLFQ TWSIAGYLVS 600
  601 KLLLADPSKA NILITEEDSD LVNALINANP KGKRGRKNLK QTYIV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle