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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|92886298
Protein type: Globular with Signal Peptide
Type Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSSAISQPR LSTPTLVKSM FNSSGLSLAL QTNLEAQGGD MKRLMAENFH QTNNGLRRNR  60
   61 EEEEHESCRS GSDNMDGISG DDFDAADNPP RKKRYHRHTP QQIQELESMF KECPHPDEKQ 120
  121 RLELSKRLCL ETRQVKFWFQ NRRTQMKTQL ERHENSLLRQ ANDKLRAENM SIREAMRNPM 180
  181 CSNCGGPAII SEISLEEQHL RIENARLKDE LDRVCTLAGK FLGRPITSLP NSSLEIGFVG 240
  241 LNNTLPSTMP LGQDFGMVSM SPPSITRGTS MVTNTNSNGF DRSMERSMFL ELALAAMDEL 300
  301 VKMAQTNEPL WIRSVESGKE IFNHEEYTRI ISTPCIGLKP NGFVSEASRE SGVVIINSLA 360
  361 LVETLMDSNR WSEMFPCVIA RSSTTEVISS GINGTRNGAL QLMQAELQVL SPLVPVREVS 420
  421 FLRFCKQHAE GVWAVVDVSI DTIRETSAGA PTFLTCRRLP SGCVVQDMPN GYSKVTWVEH 480
  481 AEYEESQVHQ LYRPLLSLGM GFGAQRWVAT LQRQCECLAI LMSSSLPSRE HSAISAGGRR 540
  541 SMLKLAHRMT NNFCAGVCAS TVHKWNKLNA GNVGEDVRVM TRKSVDDPGE PPGIVLSAAT 600
  601 SVWLPASPQK VFDFLRNEKL RSEWDILSNG GPMQEMAHIA KGHDHGNCVS LLRASAINSS 660
  661 QSSMLILQET STDASGSLVV YAPVDIPAMH VVMNGGDSAY VALLPSGFAV LPDGHSNGSG 720
  721 NHEDASQPRV SGSLLTVAFQ ILVNSLPTAK LTVESVETVN NLISCTIQKI KVALQCES

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle