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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|92877619
Protein type: Transmembrane
Type Confidence: 0.87
Topology Confidence: 0.46
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGYTCITVSL LPPLHLRHRS PPPPHFPVTT FNPFSSIKLT PSHPFRLSAL PTGGNNNNNG  60
   61 GSGGGGSWGN NPFDSDDSSS PSSNSRYTLL FTLLFSSVTF CLCQLAMAKT RSLSSEDDIL 120
  121 TQPIYEVKGG NLIKLFPDNL KDIFIASNPG LFSELSSLNS SQVPTFLYNK CREFVVRLML 180
  181 PEGFPNSVTS DYLEYSLWRG VQGVACQVSG VLATQALLYA VGLGKGAIPT AAAINWVLKD 240
  241 GIGYLSKILL SDFGRHFDVN PKGWRLFADL LENAAFGLEM CTPAFPHLFV PIGAFAGASR 300
  301 SAASLIQAST RSCFFAGFAA QRNFAEVIAK GEVQGMVSRF IGIGIGIGLG NCIGSSTPLV 360
  361 LASFCVVTWV HMYCNLKSYQ SIQLRTLNPH RASLVFSEYL LSGQAPPVKE VNAEEPLFPA 420
  421 VPILNAPFAN KETQSIVLSS EAKDAAVEIE SRLQLGSKLS EIINNKEEVL ALFSLYKNEG 480
  481 YILSEHTGKF CVVLKETCSQ LDMLKALFQV NYLYWLEKNA GIEGRGTLYD CKPGGRLQIS 540
  541 LEYAEREFNH VRNDGESVGW ITDGLIARPL PNRCRPGNTE LIQDVEEFKG IDWFFANAVE 600
  601 DHIPWCKACN SAGVMAGRQL QIVEATWWCD 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle