YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	AIL1_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKWLGFSLT PPLRICNSEE EELRHDGSDV WRYDINFDHH HHDEDVPKVE DLLSNSHQTE  60
   61 YPINHNQTNV NCTTVVNRLN PPGYLLHDQT VVTPHYPNLD PNLSNDYGGF ERVGSVSVFK 120
  121 SWLEQGTPAF PLSSHYVTEE AGTSNNISHF SNEETGYNTN GSMLSLALSH GACSDLINES 180
  181 NVSARVEEPV KVDEKRKRLV VKPQVKESVP RKSVDSYGQR TSQYRGVTRH RWTGRYEAHL 240
  241 WDNSCKKEGQ TRRGRQVYLG GYDEEEKAAR AYDLAALKYW GPTTHLNFPL SNYEKEIEEL 300
  301 NNMNRQEFVA MLRRNSSGFS RGASVYRGVT RHHQHGRWQA RIGRVAGNKD LYLGTFSTQE 360
  361 EAAEAYDIAA IKFRGLNAVT NFDINRYDVK RICSSSTIVD SDQAKHSPTS SGAGH

Type	Start	End	Confidence
Signal Peptide	1	18	0.67
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	415	0.99