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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|91084329
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.17
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARVPPKAPL SEQERLALAA KLDQELDEFI DSLPKRKPEE PVPFDRWEED ITNHPFFMKT  60
   61 VPEDGAPLHP LYEGLQKLKY DPDENEPQDL AIAYKDDGNF NFKHKKYRMA VISYTEGIKA 120
  121 KCGNDEIEAT LYNNRSAAHF FLGNHRSALA DAEMALKLKP GYGKALVRAA NCCYKTGKFD 180
  181 KAIEYCDQIL GGNDNNNNEE AQKLREMSLN SKKIAERDAR RREKTERKQQ KEEALIIGEI 240
  241 LKRGIDIEGR ENLNLAKLEP QFPQLFNSRV AIRDGRLVWP VVLFYPEYKI MDYIQEFDEC 300
  301 DCFSEQLSQV FETRPEWDCE GKYRVGNLNV YFEDKKNRIV PVDRKHSPLL VPLVKVRLAL 360
  361 AVLVPKAVVN PPPRRRRSPL GPHTDAVLCQ LVGSVRKTAV KKCDVVSLSF IVDDVKCGRV 420
  421 AGEFLRSFSA LRRLQGGGGR SRLRHASLGA VGAAGGRLGT GFIENFNVSS SVEAYSSAFD 480
  481 KSEHLLEKMN LEQSIAAVFN KVAYGSTTKR SIPDNAYPVT TLATPLLTTY KYSDGNDEWE 540
  541 RVDVKNERPS GRSSVDFETS DYEEKKDDGY GSDLEKDHVL PTSAPAADIL KNNNNKHYNN 600
  601 PNRYNNDRLK PDFEPGEQVT ESNIKSTTGA SLHRNVRPTK SMYSKDIPSY IPPNRDFFTP 660
  661 PIPPAFQHPF ADKPTLRGTN SHGFASRRPI PPPSLMPSKD RIPFRPDLPK VNAEKIPEPK 720
  721 TEKTEKKKTL NTPSQSAKLG DFYGLNRHNE TSFEYEKSYA PEPSITRILS GSNGRHDDIQ 780
  781 IPEILYRAVT ATPQNVKTTK TRAPAAEPSV EIVRDEVEEH ETERSEEITE SVTVRKEETT 840
  841 QVSVNLPNVK EKETNVTKAS TEEIWLICWN VHVYLVVFGY ILLAIYSIYK LVRYENDPHM 900
  901 FSKSYFLTIH LMLTVICVLR IFYLTYDPYN VNKSFNIFLY EFLHSFPLSL LATTFAVLIL 960
  961 FLLKRTLTHL EVKTRPVFLV VFALLHIVLC ICLSTFESFG HFEKASLIVC RPVFVLLSWA1020
 1021 LGFSYLYLYR IIKNVLAKKS QNLSEMCTQN ISYASHITIA VALLFILLGF VQLYALFFIK1080
 1081 IDRFNDETKH HWILWGFELS VRFLEISIIT LLAIVVSLKM SQREKQTGGF PLFPCTTSDS1140
 1141 STDNIYPNNC NTNPNALNYS RNEMIMDNIP TEPVERPNLL KTAFQNDSFD KKSTLERYHS1200
 1201 DSERTSNFDR FERPNWSDRF DSRPNNHEAN FGRSSARLNS AKYYTKPKYD DEGGAQERNI1260
 1261 YSEPVDNHQY ERTRHDFERG DFDRRSRNSS NTSGRRSTGR TRKNHARPHL GVQTLPNHQD1320
 1321 SMLVDEQGFV RFRHMQEEKP SQGHFSDAST NPFENDDDVD DELFLRNSRR SQGGPQASFD1380
 1381 DQLQSFQERK RAIEDRTINS TEKSLSILRD SEQIGIATAE ELMRQREKLE KTDKQLDEIN1440
 1441 ATLRFSQKHI NGIKSVFNSL KNYMAGKNDA SPSPPSKTTK SESEDLHKEF EQKLSTYDRF1500
 1501 ENHPSTRLKN LDYNNAGQTS GSKDFSAKLD ANLQEMCSNI SRLKNLATDL SFEIDSQNDL1560
 1561 ISTITDKAET ADMTITKQNK DMMRILKKSY VLFYRHCHTT LTAYSLLTAT GMKLGLHKWK1620
 1621 HEKKEKGKMK TLQKLYDAGK FEFITENLNE VTKAFINSQL RNVSCQPTAR RWTDEDKAFA1680
 1681 LSLYKRSPRL YKYLQVHFQL PSSRTLKAIL AKIQFDTGIN PGILEHLKNH VSKMKHADRY1740
 1741 CLMRCRFVKD FIMNELNSGY EDMGSLGRTN KAVNHALVFM IRRLRLQWKQ KEYFNFKDSY1800
 1801 MKMKVKVAAA QLSSSVAAAI ETFVSFAHIL PSEAIHTAEF VQKVDNMLEE RKKIIKLTYE1860
 1861 MDPSFGKSPE IVSLIRKTEI KITAANFFVL DKSTILDVLE TIVAFVIVLL GRWAKLGHRP1920
 1921 SIHHQDLVRV HDGVQPMGDG QNPPVRPTIP IFSPGLMLNV TLLSTVVLLR GYFMVTSSKR1980
 1981 MRPLLGHKSD GTVVPSSFSG SSSAYSTTRS TEVIWESSSL QVLVPYWIKP TREVDWVMAK2040
 2041 PMVPTMQPQP VPPTAASHWP ALSQRYPQQQ QEPPKPQGTM TTAETLAQLS QACKRLDQLV2100
 2101 DLSKIIKAIG PFLPMATNDE TENDNKMFGP LVFKPSGPPE TETEATCLLC DNTFNITLRF2160
 2161 DIFVRHLFEV HYLVIEEVQN IANLPQYCQY WRDKFKETPI EEIIPSIKID SSNQTYFLLS2220
 2221 TLLKEDKLLR HKLHLEHVLR VQEFERVDGG YQRPCLFCKL HFEGTRTDFI RHLESQHNLQ2280
 2281 LGNPQNLVFV EELLEKIDEH LAKLTCIFCQ RVFPERSVLK EHMRKKLHKR INPRNADYDK2340
 2341 YFIANYLEPD KLGKKAQERD VMLQQDDSNN DEEYDDWYEK DDFITCLFCE KRDTNINTLC2400
 2401 LHMEADHDFD FAELTQNFDF YQKVKLVNYV RRQVHNHKCF YCDLSCKSAK NLQEHLFEAQ2460
 2461 HCKIPDLKIF DQPEIRWLTR TSRIVALCSA ANFINSADRV IMPIAIVPMT DIFQWSLHAQ2520
 2521 GWILSAFAFG YFTSQILGSF WASKLGAKNV LICSVLLWSI ATFITPFLAH SITALVICRI2580
 2581 ILGFAEGLGL PTIFHLFAHS IPVEERSRAF SYLLASGSVG QTVASVLCPH LSWEACFYWF2640
 2641 GSFGFVWVVL WYFTYPEDAF SAEETIPLHM PKVISRNIRW ADFILSKPLW AIYLAHFAMN2700
 2701 WSSYIIMQWL PTYLARYLGG NAHSLSLTAV PYVVNSVFGV ISGHVADGLL LKGWSVLNVR2760
 2761 RLMTSVGLVG PALFLAIFCV VDHLPFAVIL VSISMGLSAS NSAGHLSNHV DVAPNYAGTT2820
 2821 FAISNTIATI PGILCGPVTA SLVTASDGKW MSVFLGATFV NLMGAFVYFT NSVATQVFLL2880
 2881 NQALAPDFAP EPFIQWLTSP ELQGAQSTAY SCSRTDFITF FLNYVHEEIG SAISERKPEP2940
 2941 LDTSKSSTEL GPHDLNTSVC NSTPKGGSDS SVLSYMSPIS PICLGDFFVN KRAPPRKTKK3000
 3001 RIKPTNLTLN SSSFHKSDNS FNFTSESEEF PSGRSFLLEE RLKVDFRSPK TVIPGGEVLP3060
 3061 ELGLVTNRPQ IDRIVQLYSL LIADNCVLNL TREIYFLITL LLKKQFYNND WGINVLSDTI3120
 3121 TGFLFNSIHN VVYFASKSLE NLVGVLRNFD NSTVRLLTEN KRLREFAPTL IAQLEQTVKP3180
 3181 DRVLISLENL QNNICFNSDT DNRNNFPNDL SFHAFKKQRD LFYDILRVWE QHHLAPGFSY3240
 3241 TVSLGGKIKT LLSLSLEPTN FVHFARLFKG QLLTCRVCDD LIITSLDVDA QKLNKLKNRC3300
 3301 VTKESNQGLN SLPKFSESEE FFRDFIVVGA NFAFNRHLAD AFVEEIVELN ESYFGNAEED3360
 3361 ENSVDLVTKK SYFSCVKSLR ILAKFLGFVE SLPYKSECGN YSEQLLTTHL KIRKQICPTF3420
 3421 DVKTLLENSI RRKSVILCVP WLIKYLSMLD TVTLKLPYYT QIQNTLYWIY RNFNWGPSPN3480
 3481 IYLIKFCLGW LFELPHIPDN NALYFTTEET TQNSTESPKT SYIDQLEIVD QDILYFCCPY3540
 3541 LNEIKKLLTT TTTNQMITIK HITPVTAQQS PDEIARKKLE QQLEEAFFNG QPISLRKSVE3600
 3601 FVSERVASTC VKYVCSVLVP EFKKKSLETF KSMISTIDDE TVLKQKANQF ATDCLNELQV3660
 3661 ACEREIKKIT QNKIRNGIES LLAMDVLPQT RDVCVGITEK MCLERVRQWL EAHVTSVLVI3720
 3721 FSKDFNDEVQ KLTNQETKRT KPLFVLPPGG SKRQHNDRTI SGAHLVTKFQ SLTIDIIEGK3780
 3781 NVHNQLISLL DATSDSINER GDFNQCVVAT LCTQILDVVI LLLGSGVLDG VLSKSCDIWR3840
 3841 LYYRDDLFKS LLSPRNVIIL GRSKAAWDAF AQFCALLLKQ KLLTCDSFEA QCTGIFRTDW3900
 3901 DQIQILGVVK RQSRRLIFDK TRLLDEKQRE NNCHKHTNRH CDNEAPLEFG AAALDFVNFQ3960
 3961 NPALAEAIFF DFDVTVVDTI VENFARNCRY LAIVVVDFAG PCLYRGGVAW KHMLLDQFSE4020
 4021 RYIASQEAGS KVMALRLAAT TCASSTSAAS STTTIGDCNS SKNSALQRDA TLVVMPTTND4080
 4081 CCIAGRNSTH LRRFSPAPVI KLNCFNFSLF DWPPARISLE VQGIRPSRNW SRASFLCEMT4140
 4141 NMGLFLCHKW AFCSKVVAIF TPRCVLPVPG GPWITTNSRV RAAVKACIWA RFSERPHLSG4200
 4201 AKPERYGGNA VNQLNFLLNP LSVIPQIGQF YRPHLCHQTG PKIVIQIGVF PRKFALNLAK4260
 4261 KALIRVQHQL IEITRHGDRL VTFLGQSPRT PQLGGLHGGA ILMLRRDNDD TKKLRAQCQH4320
 4321 RLDLKKMGPG GPPVCRLCLR HGALDSLFAP HKKTTVEYAA MLGFCTSVQA EVDDGLPGKI4380
 4381 CQKCAKSLVA LYKFKKIVIE SDNKLRNNLP SHNENGGQDV AKGPKAKKTH QCDMCGLFLS4440
 4441 CRSNLVQHMK LHTGEKPFKC DSCEKKFARV EHLKIHKRVH TGERPHQCTI CAKRFIQNAS4500
 4501 LNAHLRTHSG ERPYMCSVCG KSFSQSNSLT YHMRTHTGET PYKCKVCDKG FAHSGNLNIH4560
 4561 MRFHNNIRPF ECELCRMKFV TSSHLSVHMK RHLGEKPHKC KVCNKGFVRS EHLKDHLVIH4620
 4621 SGERPHVCTV CLKGYTQSSH LSRHMKTHKL QVLAKFGPKL GLAQRSPTIS YITQTQIKDI4680
 4681 GGTVELSCSV QYTNDYPVIW MKIDPRSNAN SLPISTGSTL ILHESRYSLR YDEASSTYTL4740
 4741 QIKDIQETDA GFYHCQIIIS PSNRVSAEVE LQVRRPPFIS DNSTRSVVVS EGQAVQMECY4800
 4801 AGGYPPPRIS WRRENNAILP TGGSIYRGNV MKIKQIKKED RGTYYCVAEN GVGRGTKRNI4860
 4861 AVEVEFAPVV TVPRPRLGQA LQYDMDLECH VEAYPPPALT WVKDEVALSN NQHYSISHFA4920
 4921 TADEFTDTTL RVITIEKRQY GQYICKASNK LGSAEGVVEL FESIIPVCPP ACGQARYGDA4980
 4981 ATLSTSTAAI CLTLLFVLFR SSQSAKIVAN WSMYLVRTPS DDLTMSTAAD NAHSSDHRVM5040
 5041 AWSVASSVGL SAVRASRMAR ASPSLPIRCS VRALSAFAHS KFGVFFSTFS HSWSAFLLLP5100
 5101 MSSQSTTELT TCRRRTKGAP TFHLNVIKPL NCWSNAPKPS TMRLSLVRRF TTTAPRPVFG5160
 5161 RLKSEAPIYW ETLKTVNREA FQKKIQSLNN WYTRFLHLDE VKLYQDRVVA LQERLLEAQE5220
 5221 KRREIGRSLA DIRKRSNQLQ DEIHKVKRQE NLERFLTLMK EETEVLRQES EVMRSFQECD5280
 5281 RAERELFTAF TNAVRDSHEK QRAQVEYTKY FGIILSITGS FLAFCYTTLR KDDLKRFIEE5340
 5341 SMSRNLVVEA PQSSNNNDLI NLVKSETARL SDIVNFRQNE ISRMIEREND AQKKQLLSTK5400
 5401 PFVTNLARDW SPRMDFHMRV EHTRLGERLA TDGTNMGFFA RMGAFVHHNM VARGTAFVAV5460
 5461 ATLVRGFPGV DEHSDSEESN TTTSGHRLPK GYPHKSYYSR FTYSSQSTPT RRYQCDGTKS5520
 5521 TRSSSTASEN KITFNEDEYT RITTPRQDVL FKKGYLNKPK TYQTQTSTGN STTSTDLEYE5580
 5581 SQFVFPNGFV DQNGIYYINS FEPYPVMVYN PPTYYQEFTN IKAKRCSTGS LTESTSPNNE5640
 5641 ETSQSETPEV NPVYNVVYPN YYCNGGVYEE PQNGAISEPE ARRVKKRRRR KPSRSKEGTT5700
 5701 TSESSDEGEE EEEEEEEKEV FSEKEQQKTY DLKPDAEEFV PRAYRQPPET IPMEAANVQF5760
 5761 IKIPSNFVPV PILSDFNAFI PPGIPINFIP QNFINYVPLK AAVQSDDGKA ATDDTVKELA5820
 5821 TVEVPKNQID IAKIVSKLEE AAKEQDKDET TPNHKAKKRH RYQKVELRKP PPSPAEPFKP5880
 5881 PLRNYSETLK KIPLKTNERS EEKKTLVKEP VKDHRSEQTP PKVTNEWISV SSRKKRKNKN5940
 5941 VEEIEDFEEV EAAPPSEEKV EPVVIIQPPP PPPPPPPPPE PEPVITVKKV KKKTKKVVAP6000
 6001 PPITKRVIIK DVDLSVEEVK EEPKPVVEEA PPPKKEEKVE EIVEKKESPE KKTKKKKKKV6060
 6061 GKAATIVNSQ SSSNTTLNVT DDSYDFLMDE SMEKTNVEVS QELDKLIQRG MYNNLEEKIK6120
 6121 SMNIESNDNF FKSIITNISS SREPSVEKPY IKTPDLSKIL PNQALLKPRK PGDFLGESPT6180
 6181 PSPLGGGSPP PSDNLYPITK AVKEWMSKTR ESAPDIELLK SPSEIFREFT EREDDDDVTS6240
 6241 DEDCRTVQAE QTGKYPKHGN LPYRAICCSI IPAMPSFLAA SRAVEPFSWF NLDTTVSAGW6300
 6301 LTIAQKTPAM SSTVRSKQAN FIMILGQAVR KVVAKPGEVW IFTLAASIGE SAMSAKNSAE6360
 6361 ALAAKYSQVR YKKAFSSPIK SSVFLGLPAT NLKYPQTLTL KTSYNPNLHN PCAEYPKNVG6420
 6421 AHPKAKPLNP SSFMVTLNPC AEPNSQLSPS AVLEAAAAAA IVLPATRDFT SPISCGASLG6480
 6481 APFWHIARDN NDENIVIGVK AAWKTGNYLR EYAKTIRDLI AKGEGDLKVQ NVIREQMNTI6540
 6541 YRIVGICLGV PAETFTFTYY DKNKTYHSIG PITPKAFYEE HVKPVFDVDN KVCIVTDPRP6600
 6601 SNQYGKVYTV DCLGNVVGGR PCIYNNQPVE LLLDATAKSI KDGEAVWFGC EVMKRFAGKQ6660
 6661 GILDLKIHNF PLVFGVDIQT ILSKADRLIY GDSAMSHAMV FTAVSLNEKD EVTKLRVENS6720
 6721 WGEDRGEKGY LIMSTDWFKE YVFEVVVDKK YVPVDVLEVF KQKPIVLPAW DPMGTLANVS6780
 6781 SMASIEYDLD TSGGLMDQIQ ALIAPPQSED TKSRKGATAT EHPYFKRPGK GHNHDSCDAC6840
 6841 GEGGDLICCD KCPSSFHLQC HDPPLEEKDI PSGEWLCHSC KYAKKSNAPQ TRNKRSASTP6900
 6901 AGKAPKKAKV SPMDLLIQAA SSMNPKQFDL PRSMSVPCIF PGTDKVEAPY SRNGRKSMKV6960
 6961 HKDHEKKQDA TIFLPAKKCH ECRKSCRVAP LISCDFCSLY FHMDCLDPPL TTPPSGRWMC7020
 7021 PNHVEHYLDS KLLTSISATE RIKLWDKFNG PVDQDAIRLE FFRKIHSKNP PFRVKIKLAS7080
 7081 KNRVKVPAMV KYHYRKPVKL LPSLKDVLRL ESVLNNREQM VEDAVKCEDV EVVQSLCNGP7140
 7141 EDQTCDKSTD ENTNNTQEDD TKEDFCRNGC IKNEVMNGAT VDQKDNIFLP DVVSDITNEV7200
 7201 EVELKQLDDR LVKLLAYQRI QHLLNQPNNS ANLNLYLPSN LQSKLRHMPM PSELLTPADI7260
 7261 ERISRVFSSP KKKIKPKSAL RARAMMCPVV SPHFYNVRTS EVSPNDVRHD DSFLGFRPTV7320
 7321 SARYPEAVAM RYRVLNVGKG SSNDVDLERF GHCNNISARH AIIFYDEFTK NFELINYSSH7380
 7381 GTFVNNVLFS NDTNTERPKQ CEGKIVPLEV QLSTIEPVKL AYASYESTNS PSDHDPAPLI7440
 7441 VNHGLFGSKS NWNSLCKVYH NKTNRKVIAV DARNHGDSPH TQQHTYEHLA LDLRELLTQL7500
 7501 KFEKAAFLGH SMGGRAVMYL ALKYPELVDK LIVADISPVT TSPNLKTMPG LFNVMQNLNM7560
 7561 PKNVSMSVAR SQTDLQLARF IGDKGLRNFL LTNLVQKLDG SYMWRINIPT LMASFEEIAT7620
 7621 FPPINKYKFE GPVLFVGGGA SDYIQKSDHE QILKLFPKAQ FQYIEGAAHK APRIGVDGFV7680
 7681 PTFGIFVVFV NVLRQGFGDL EEDGAALQVP DFEPGEVNVV DVGVRVAQIR FCYFRQPEDV7740
 7741 LRCDGFGGVG GREWSGDGLA FFSNHTHFLC LIAIRTQLKL YKVHDHFNKY DLGVLWQVRG7800
 7801 FRPKNRVVVK MGTPEMLFLY PILFILPAMA SARIDCSRES YDECIRIADP LVKQPHLIFP7860
 7861 DNMNDIDIVC KTWNKFVDCL KYYTDNCFTE QQRRQFNKAV EDSIESVHQM CVQPSYQKEY7920
 7921 LQYAPCIKST ITEPAHCGSH YNLLVDQVAQ GEIISKSTLC CSHDRFKQCI MRETRRLCDR7980
 7981 NAPEFATHLI DKALSFLQDQ CYNYIPNSGD CTTLATDSQP FSTSSSEVYP WSTIEDIAPK8040
 8041 EILPARVTPP KPPTTWLPSS SITPNSDASP TQMLGSRTRP ASFGRASSWS DTPTGVSTTP8100
 8101 SSRPDWATVT SWSPQSESGK TTTWYPAAGT ELGNQVEEPN QQGLTKPRNG AGRGAVGVAA8160
 8161 VVWAAVCVPA ADGSGIVSGT GTVPPPLCSR LLNIFAKAVL VLALTTNCCE LASGGFVVES8220
 8221 GITGPKGLTT PAFATAVTYT ASTATVVVDS GQTVVAAVVA AAAAVVELDS NPARLVVSLG8280
 8281 VQVYELTLRL IGLLGGRPLD SWALNNIDRM SDSHLLLLLP QVLIDLRALL LRLRRLLLLL8340
 8341 VELVGLVLYE LLIKLLRLLI LVELLLHGQL IRGQLTSQLL KSRALLLLLL LADQSVQMDL8400
 8401 IWNIKLLWWW LLLLNELLRL RRVVNNTSGD LLIRLYNSRL CWVRLVICAL FAANCRPLGG8460
 8461 LAGGWQRCAR LTSASARVEA KKSQQMAEAD KLNIDSIIAR LLEVRGARPG KNVQLTESEI8520
 8521 RGLCLKSREI FLSQPILLEL EAPLKICGDI HGQYYDLLRL FEYGGFPPES NYLFLGDYVD8580
 8581 RGKQSLETIC LLLAYKIKYP ENFFLLRGNH ECASINRIYG FYDECKRRYN IKLWKTFTDC8640
 8641 FNCLPVAAIV DEKIFCCHGG LSPDLQSMEQ IRRIMRPTDV PDQGLLCDLL WSDPDKDQMG8700
 8701 WGENDRGVSF TFGAEVVGKF LHKHDFDLIC RAHQVVEDGY EFFAKRQLVT LFSAPNYCGE8760
 8761 FDNAGAMMSV DETLMCSFQI LKPADKRKFQ YNMNAGRPVT PPRGGTNKNK KK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle