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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|89886303, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.52
Topology Confidence: 0.20
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVEGRITIL DVGLIAMVVL LGPVAAAQSE QRECAYAEQP QGLAERIGGR GEGLVFHENS  60
   61 TIRCYQGHRC FGLWGKKNNG VVLVKQGCWT NVGDHQECYD RCVVTNPPSV AQNGTYRFCC 120
  121 CNKDMCNLNF TEDFPPPSPT TAQPLQSRRL HREEVIVVAL ATVSMVAVLV ILLFFGYRML 180
  181 RGRGSHSLHT LNILETALSP PSLDLDNLTL QELIGRGRYG TVYRASLDDR SVAVKVFISA 240
  241 NRQQFTNERM IYRLLLDHEN IARFLESEER VGTEGRTEFL LLLEFYPHGS LCTYLSGRTV 300
  301 DWLSCCRLAL SVTRGLAYLH TEIQRGDVYK PAVSHRDLNS RNVLVKTDGS CVISDFGLSM 360
  361 ILTGKRPPGH GEEDNSAISE VGTVRYMAPE VLEGAVNLRD CESALKQVDV YALGLVYWET 420
  421 FMRCADLFPG ETVPAFQLAF QAEVGNHPTI EDMQALVSRE KERPKFPEAW KENSLTVHSL 480
  481 KETMEDCWDQ DAEARLTAQC AEERLAELLL IWDREKSASP ALNHSTALQT PKVGSVLEHS 540
  541 STNTEDHEGA DKPLHNDTSV EQTSAGGTNP AEKKKNCINY EWQQAQSRQS GTESSSATPV 600
  601 SESCNATHPP PVATNLCAQL TREDLEIPKL DPSEVQRNMR ESSDESLMEH SQKQFCSPET 660
  661 SASHGPFYPL MKMVSEVSGS QGSSRHGDTP ITILPKQQNV PKRPSSLSLH VKPGKTSTST 720
  721 SSSLRMKFGK LGKSNLKKVE MGVAKSSVVN ATHEARLITV ANNDAAAAMN KYATEPAAES 780
  781 AGSSANEDLT FGLLNTSPDE QEPLLRREAH PDNANNNNSN NNNGEGDGDG ETEGGGEGGE 840
  841 NNESVGPTGD ASSSSTVEPV VLPGPCSAST AIPPQAQSQT QTHGEALLRQ NRVRRPERPN 900
  901 SLDLSITTLP LLGGRSVGDG TEGSGDKIKK RVKTPYALKK WRPASWVITT DTLDAEVNNN 960
  961 SRHGGGLGQN QNQAGTSRPK SASAVYLGSR GGSRFSDPND CDF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle