YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	acl-5
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPEDFQHKKP RRSSSASDLG IINREKSDII DAKLHETNVP EAKQTTVSVL VDDTLDFITA  60
   61 GMEAVIEDQV TNRFSAAQLP SWNLLSRTKY SFHFFNWQLT LLWIAGFMFR YYVLVPCRIA 120
  121 LFGIAIVLMI VSTSIIGLVP NAKVRKFLNR RCMLMCMRIY SRAFSSVIRF HDKENRANKG 180
  181 GICVANHTSP IDVMVLSCDN CYAMIGQKQA GFLGFLQTTL SRSEHHIWFE RGEAGDRAKV 240
  241 MDRMREHVND ENKLPIIIFP EGTCINNTSV MMFKKGSFEI GSTIYPIAVK YDTRLTDAFW 300
  301 NSSAQSYGRY LWSMMTSWAI ICDVWYLPAM TRGENEDSIS FAKRVKRAIA KKGGLIDLEW 360
  361 DGALKRERVS SKLVTLQQKL YFERLARTTT LNAMLEEKSS DILNIMQGIS EEERDELLKQ 420
  421 IDEQDDEEEM IRKISSLKPK FKIGDHDADE HIKSD

Type	Start	End	Confidence
Cytoplasmic	1	93	0.96
Transmembrane Helix	94	113	0.93
Non-Cytoplasmic	114	118	0.84
Transmembrane Helix	119	141	0.92
Cytoplasmic	142	309	0.92
Transmembrane Helix	310	329	0.54
Non-Cytoplasmic	330	455	0.60