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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE40237
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGHPPPKETK KGCQVKSFVL PVFCTLLGVL ITAFITWHIT KSQYSRNDPH DEIESENVPA  60
   61 AKPEDNISAS ELRLPTSVSP ISYQLTVKTY LPGYGYTADK NNLTFEGQVL IELNITKSIK 120
  121 KVSLNSKDLN YTEEFIKKSS ILVNGKSIAF TLDDKQSTHE KIFFNLDETV EPTTSATLKV 180
  181 AFGAPLRTDM SGLYQTTYTN SKGESKMAAV TQMEPVYARR MVPCFDEPAY KATWTVTVIH 240
  241 PNKTVAVSNG IEDKVEDGQP GFIISTFKPT PRMSSYLLAI FISEFEYNEA TTKSGVRFRV 300
  301 WSRPEEKNST MYAVEAGVKC LEYYEKYYNI SFPLPKQDMV ALPDFSAGAM ENWGLITYRE 360
  361 SALLYDPRIY SGSQKRRVAV VIAHELAHQW FGNLVTLKWW NDLWLNEGFA TLVEYLGTDE 420
  421 ISDGNMRMRE WFTMDALWSA LAADSVASTH PLTFKIDKAM EVLDSFDSVT YDKGGAVLAM 480
  481 VRKTIGEENF NTGINHYLTR HQFDNADAGN LLTALGEKIP DSVMGPKGVK LNISEFMDPW 540
  541 TKQLGYPLLN ASRINNTHII VEQSRFKLLA TGKEEEKYSN PVWGFKWDVP VWYQVVGSSE 600
  601 LEMKWMKRNE PLIIKSDKNV IINAESNGFY RAGYSSGLWK EISEMLKENH EQFSPQTRVR 660
  661 LIDDSFALAR AGLLSYSIPL NLITYLKNEK EYLPWSGAIA KIRELIDMYG SNPEKDIVNK 720
  721 FMIALAENAP ARRSIDFVSK NYLDEKKFYE VGAAQQIILN SCGFGDSVCQ ADMVKMFTEE 780
  781 VLAKCDATRI LSECSQIPAP FRAESYCEAV RNGNSDTFEK VFHWYKTERN QVEKLNLMTA 840
  841 LTCSKDILTL KKLLLDAMKP EGSSFRLQDC AALFAKISSN DATTDAMLNF LIDRWEDMQK 900
  901 RLATDHSGFS RVLSSIVNTL KTRGGLDQLR KFRKKAPKAS EFGLDKMEES AEVTVTWRET 960
  961 NLKFVTKIIE EISKSL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle