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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|94733984, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDITTTTDTT IMLTRGAVTA EAEEEQGHTS SFKKRRSYSK CRDCVARVQK FLVSKLGEDW  60
   61 IFLVLLGITM ALVSWSMDYA SAKSLQAYKW FYGELRGNIP LQYLVWVSYP MVLILFASLF 120
  121 CHLVAPQAIG SGIPEMKTIL RGVVLKEYLT LKAFVAKVVG LTAGLGSGMP VGKEGPFVHI 180
  181 ASICAAVLSK FMSFFSGVYQ SPYGYTDILT VGCAVGVGCC FGTPLGGVLF SIEVTSTYFA 240
  241 VRNYWRGYFA ATFSAFIFRV LSVFNKDAVT ITALFRTNFR MDFPFDLQEL PAFAIIGISC 300
  301 GFLGAFFVYL NRQVVLFMRR PNILTRFLTK HRLVFPAVVT LVVTTLTFPP GFGQFMAGEL 360
  361 MPRECINSLF DNFTWTKIWG SPLPPGLGRS AVWFHPDVSI FVILILFLIM KFWMSAVSTT 420
  421 MPIPSGAFMP VFVLGAAFGR LVGEIMATLF PHGILFDGIL YRIIPGGYAV IGAAALTGAV 480
  481 THTVSTAVIC FELTGQISHI LPMMVAVILA NMVAQGLQPS LYDSIIQFKK LPYLPELGFG 540
  541 HISQYNIFVE DIMVRKVKFL CSQSTYREVL HLLDSTSLKT FPLVDSKDSM ILLGSIERSE 600
  601 LLALCDWWLS AERRILIQGQ SPQGQVPCAK ISWESFAFVD EDEEDEEENV DEKTIPVQEE 660
  661 RNGPVPPPKP SEPSTNHTSP DKGPSQSFRR LLRNLFSSSS ERHTEGQPQE PYPPPLTDTM 720
  721 TPEQIKAWEE SEMDKPLEIN QIRIDPSPFQ LVERTSLHKT HTLFSLLGLS HAYVTNTGKL 780
  781 VGVVALKELQ KAIEGSTRSG VRLRPPLASF RDTLRKKASK PQASSPPSSP VSTTAPSSPL 840
  841 SPPVISHSHS HSHSSSPPAP VEENKKEMEV WIEGVKRDVI VGKSSSTTTG SSSSSSRGNG 900
  901 SSDSEAGSGD SSPNLPPSSP PPPIPLSNLQ AVPENKEEEE SEEPV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle