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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|94732579
Protein type: Transmembrane
Type Confidence: 0.68
Topology Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LPSLWIRDTM DLTAVALLVS LVSVSLSAEN AGGKARSCTD VRQFYSGKGF TLNGVPQSEI  60
   61 SGEHLRICPQ GYTCCTSAME ETLSNLSRRE FEGLVREAGR SIQALLNAQY RTFDTYFLEL 120
  121 LNGSERWLEE AFVAALGELY RLNAGVFRDL YAELHRYYSG ASLNLEEALD EFWMKLLERL 180
  181 LKASDPETAS LLSDDFLDCA SKQTETLRPF GDAPRELKAK LVRAFIAARA FVQGLNAAGE 240
  241 IVRKVSQVPL SPECNRAIMK LVYCPHCRGL GSVKPCINYC KNVMKGCLAN QADLDTEWQS 300
  301 LIETMLQVAS SFGAEPSMDT VIYSIPVRIS EAVLAMQENM EIYTSKVFKA CGDRGEEGTP 360
  361 SSISEEPKKK ERTVTALEYK PSPKSAARLE VQVTDVYSKL KEMQLYWIQL PSALCSGKTA 420
  421 SSTTGDKCWN GITKASYLPE VMGDGLANQI NNPEVEIDIT KPDRTIRQQI MLLKIMSNRL 480
  481 KNALEGNDVD FQDTSDDFSG SGSGMCADHL CVRGRPPVFG PKTDRPKLYA TGPENKRVKG 540
  541 SGNQIQPSFI LLIVFFVSLL LRR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle