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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ALB33_ARATH
Protein type: Transmembrane
Type Confidence: 0.72
Topology Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFRRVLLSH LRRSHHTCSS LSPHHVSATT QPSIALALFQ SRFFSTPSDL DSELTRFRDD  60
   61 SIAGVGSNDH GLEFDDSIAS LGSNGHGLEF GDSIGSLGSN GYGLEFGDLS QDLSNYDYLT 120
  121 QPVISLLDSY HDITGLPWWV VIATSTVAFR TALLPILILQ RKQTKRISQF LPKLPHFWPP 180
  181 QGSGRSVLDQ LKLFRKERKD IGCPSFLWVP AYFSIQISCF FLWITSIRRM SLDHHPGFDS 240
  241 GGALWFQNLT EIPNGLYGPL FPFLIAGLHY TNTQITFTAS SVHKVDKFTE LAKAYKTFLN 300
  301 LLTCALYFLS FQMPQGSLLY WATNLSFSIA QQSILNHPVV SAKLGLQAND SVQKEAGNPI 360
  361 LTNINEGKLT DPSSKGRLIS VHNLTPKELV ALSAKYLSGG HKDKSIPLLR LALEKDPEYL 420
  421 QAMIILGQAL YQKDQFAEAA KCLEQAASKL LDTSPTEVEE VDLLIVASQW AGVSNIRQGK 480
  481 TSEGITHLER VANMKEPDDP KSKAHYLDAL VLYSSAIFNE GRREEAAKYL RRVVAYDPSF 540
  541 SELLKQCEED DTIPTSSSSN STSKTS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle