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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|110739551
Protein type: Transmembrane
Type Confidence: 0.95
Topology Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DSLLFLDGFN LNSDNQGTIS MSYANDSFMY HFNLDPEGII YQKDWSTSMR TWRIGVKFPY  60
   61 TDCDAYGRCG RFGSCHAGEN PPCKCVKGFV PKNNTEWNGG NWSNGCMRKA PLQCERQRNV 120
  121 SNGGGGGKAD GFLKLQKMKV PISAERSEAS EQVCPKVCLD NCSCTAYAYD RGIGCMLWSG 180
  181 DLVDMQSFLG SGIDLFIRVA HSELKTHSNL AVMIAAPVIG VMLIAAVCVL LACRKYKKRP 240
  241 AKDRSAELMF KRMEALTSDN ESASNQIKLK ELPLFEFQVL ATSTDSFSLR NKLGQGGFGP 300
  301 VYKGKLPEGQ EIAVKRLSRK SGQGLEELMN EVVVISKLQH RNLVKLLGCC IEGEERMLVY 360
  361 EYMPKKSLDA YLFDPMKQKI LDWKTRFNIM EGICRGLLYL HRDSRLKIIH RDLKASNILL 420
  421 DENLNPKISD FGLARIFRAN EDEANTRRVV GTYGYMSPEY AMEGFFSEKS DVFSLGVIFL 480
  481 EIISGRRNSS SHKEENNLNL LAYAWKLWND GEAASLADPA VFDKCFEKEI EKCVHIGLLC 540
  541 VQEVANDRPN VSNVIWMLTT ENMSLADPKQ PAFIVRRGAS EAESSDQSSQ KVSINDVSLT 600
  601 AVTGR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle