YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|110737442
Protein type:	Transmembrane
Type Confidence:	0.92
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDTVQFSAGG EILSIRLARS ELGGNKRKKT ITASIVSLSL FLILGSTAFG FWRYRVKHNA  60
   61 SQDAPKYDLE PQDVSGSYLF EMNTIQTATN NFSLSNKLGQ GGFGSVYKGE LQDGKEIAVK 120
  121 RLSSSSGQGK EEFMNEIVLI SKLQHKNLVR ILGCCIEGEE RLLIYEFMLN KSLDTFLFDS 180
  181 RKRLEIDWPK RFDIIQGIAR GIHYLHRDSC LKVIHRDLKV SNILLDEKMN PKISDFGLAR 240
  241 MYQGTEYQDN TRRVVGTLGY MSPEDILEII SGEKISRFSY GKEEKTLIAY AWESWCETGG 300
  301 VDLLDKDVAD SCRPLEVERC IQIGLLCVQH QPADRPNTLE LMSMLTTTSD LPSPKQPTFV 360
  361 VHWRDDESSS KDLITVNEMT KSVILGR

Type	Start	End	Confidence
Cytoplasmic	1	30	0.88
Transmembrane Helix	31	52	0.87
Non-Cytoplasmic	53	387	0.98