YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	DCTA_ACIAC
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.47
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTANARIPAR KLPLYRSLYV QVLFAVVVGV LLGHFYPEIG EKMKPLGDGF IKLIKMIIAP  60
   61 IIFCTVVVGI AGMEDMKKVG RTGGLALLYF EIVSSVALVI GLIVVNVLQP GAGMNVDASA 120
  121 IDTKSIAAYT APGKMGTTTD FLMNIIPTTV VDAFAKGEIL QVLLIAVMFG FALHRFGGRG 180
  181 TLVFDFIEKT SHVLFTIVGY IMKVAPIGAF GAMSFTIGKY GVGSLLSLGK LMGSFYLTCL 240
  241 LFVFVVLGLI ARFHGFSIWK FVKYIKEELL IVLGTSSSES VLPRMMEKME NLGARKTTVG 300
  301 LVIPTGYSFN LDGTSIYLTM AAVFIAQATN TPLDITHQIT LLLVLLLTSK GAAGITGSGF 360
  361 IVLAATLSAV GHVPVAGLAL ILGIDRFMSE ARALTNLVGN GVATIVVAKW TGDLDTEQLK 420
  421 QRLDNPDWVA AQEPEAILDH KTERMDVSGS R

Type	Start	End	Confidence
Cytoplasmic	1	16	0.90
Transmembrane Helix	17	36	0.94
Non-Cytoplasmic	37	52	0.89
Transmembrane Helix	53	73	0.93
Cytoplasmic	74	84	0.88
Transmembrane Helix	85	105	0.94
Non-Cytoplasmic	106	156	0.92
Transmembrane Helix	157	178	0.86
Cytoplasmic	179	192	0.89
Transmembrane Helix	193	215	0.87
Non-Cytoplasmic	216	232	0.81
Transmembrane Helix	233	256	0.88
Cytoplasmic	257	305	0.83
Transmembrane Helix	306	326	0.47
Non-Cytoplasmic	327	359	0.41
Transmembrane Helix	360	384	0.85
Cytoplasmic	385	451	0.68